Graph ofGSVA
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  • fd07d5ff (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:05:54 -0400;
  • 4036d9f1 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:05:54 -0400;
  • 4ea6b00b Updated NEWS file by Robert Castelo <robert.castelo@upf.edu> 2022-10-31 16:48:30 +0100;
  • bd55a3a3 (origin/RELEASE_3_15, RELEASE_3_15) Switching official maintainer to Robert Castelo by Robert Castelo <robert.castelo@upf.edu> 2022-09-20 11:24:51 -0700;
  • 028b1883 Switching official maintainer to Robert Castelo by Robert Castelo <robert.castelo@upf.edu> 2022-09-20 11:15:24 -0700;
  • 0c403a94 Enforcing minimum version of the upstream dependency Matrix 1.5-0 by Robert Castelo <robert.castelo@upf.edu> 2022-09-19 23:03:08 -0700;
  • ac26f369 Enforcing minimum version of the upstream dependency Matrix 1.5-0 by Robert Castelo <robert.castelo@upf.edu> 2022-09-19 22:19:18 -0700;
  • 2e3d0348 Changed coercions to dgCMatrix to go via virtual classes to comply with latest updates in Matrix version 1.4-2 by Robert Castelo <robert.castelo@upf.edu> 2022-09-06 16:25:29 +0200;
  • b40777c5 Changed coercions to dgCMatrix to go via virtual classes to comply with latest updates in Matrix version 1.4-2 by Robert Castelo <robert.castelo@upf.edu> 2022-09-06 16:25:29 +0200;
  • f4e0cc41 Bump version in release after bugfix ported from devel by [rcastelo] <[robert.castelo@upf.edu]> 2022-06-09 16:21:42 +0200;
  • b7c1d113 Bugfix when input is a SummarizedExperiment and assays contain a data.frame instead of a matrix by [rcastelo] <[robert.castelo@upf.edu]> 2022-06-09 16:21:42 +0200;
  • 100ae2a1 Bump version in release after bugfix ported from devel by Robert Castelo <robert.castelo@upf.edu> 2022-05-31 09:32:44 +0200;
  • e355c966 Bugfix when using ssgsea with one single sample in the input expression data matrix. Reported by Christopher Eeles at https://github.com/rcastelo/GSVA/issues/61 by Robert Castelo <robert.castelo@upf.edu> 2022-05-31 09:32:44 +0200;
  • 81d7a8c9 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:07:47 +0000;
  • 530f7c5a bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:07:47 +0000;
  • a2757e16 Merge branch 'pablo-rodr-bio2-gridReduce' by Robert Castelo <robert.castelo@upf.edu> 2021-11-19 12:39:28 +0100;
  • 3e59cfe4 Resolved conflict on package version in DESCRIPTION file by Robert Castelo <robert.castelo@upf.edu> 2021-11-19 12:38:00 +0100;
  • f618fa48 changing function viewReduce for gridReduce from DelayedArray by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-11-18 09:36:13 +0100;
  • dc4f6ff7 Merge branch 'rcastelo:master' into master by Pablo Rodriguez <53177189+pablo-rodr-bio2@users.noreply.github.com> 2021-11-18 09:08:18 +0100;
  • badcdf88 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:59:07 +0000;
  • c99b10bb (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:59:07 +0000;
  • 52135b29 Fixed unit test and updated NEWS file by [rcastelo] <[robert.castelo@upf.edu]> 2021-10-25 17:10:55 +0200;
  • b77bb387 Merge branch 'master' of https://github.com/pablo-rodr-bio2/GSVA by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-10-06 06:58:44 -0400;
  • af4a1586 commenting out set.seed in tests because of bug generating random num in runRandomSVD by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-10-06 06:58:11 -0400;
  • bf381b0c Merge remote-tracking branch 'upstream/master' by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-10-06 06:56:48 -0400;
  • 892a79d1 Merge branch 'rcastelo:master' into master by Pablo Rodriguez <53177189+pablo-rodr-bio2@users.noreply.github.com> 2021-10-06 06:53:06 -0400;
  • b5b3ae82 remove CITATION.cff file by Robert Castelo <robert.castelo@upf.edu> 2021-07-28 17:38:41 +0200;
  • ef2404c6 Added CITATION.cff file by Robert Castelo <robert.castelo@upf.edu> 2021-07-28 14:03:18 +0200;
  • bc7eba47 Merge remote-tracking branch 'upstream/master' by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-06-18 04:51:11 -0400;
  • 61b842e5 (origin/RELEASE_3_13, RELEASE_3_13) Bugfix to enforce DelayedMatrixStats::rowSds(), with matrixStats::rowSds() behind the scenes, giving an exact zero where base sd() would also give an exact zero. See https://github.com/rcastelo/GSVA/issues/54 and https://github.com/HenrikBengtsson/matrixStats/issues/204 by [rcastelo] <[robert.castelo@upf.edu]> 2021-06-03 17:42:11 +0200;
  • d62c7a18 Bugfix to enforce DelayedMatrixStats::rowSds(), with matrixStats::rowSds() behind the scenes, giving an exact zero where base sd() would also give an exact zero. See https://github.com/rcastelo/GSVA/issues/54 and https://github.com/HenrikBengtsson/matrixStats/issues/204 by [rcastelo] <[robert.castelo@upf.edu]> 2021-06-03 17:42:11 +0200;
  • c4663f56 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:48:35 +0000;
  • 65eb9286 bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:48:35 +0000;
  • 0fd5c15e added css fixes by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-19 06:59:41 -0400;
  • a795b9e4 Updated vignette, documentation and NEWS file, corrected some messages and warnings. by Robert Castelo <robert.castelo@upf.edu> 2021-05-18 23:31:15 +0200;
  • f2213716 Merge branch 'pablo-rodr-bio2-shinyDashboard' by Robert Castelo <robert.castelo@upf.edu> 2021-05-18 13:38:24 +0200;
  • 15a0afe4 take out shinythemes from global by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-18 12:28:35 +0200;
  • 9bb341e7 Merge branch 'pablo-rodr-bio2-shinyDashboard' by Robert Castelo <robert.castelo@upf.edu> 2021-05-18 08:19:55 +0200;
  • 8a7cd8e7 new ui updates in dashboard by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-17 20:06:45 +0200;
  • bf8d17c2 new css and ui updates in dashboard by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-17 20:01:04 +0200;
  • f30da782 new css changes in dashboard by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-17 19:29:04 +0200;
  • 282aaa63 beautifying UI by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-14 05:37:52 -0400;
  • a8e161ea added css for title and btns by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-13 07:26:15 -0400;
  • b4603e14 Merge remote-tracking branch 'upstream/master' by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-17 19:30:41 +0200;
  • beba2140 new css changes in dashboard by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-17 19:29:04 +0200;
  • a57a1bd9 Fixed message on parallel execution. by Robert Castelo <robert.castelo@upf.edu> 2021-05-17 10:28:00 +0200;
  • 02060cea Merge branch 'shinyDashboard' of https://github.com/pablo-rodr-bio2/GSVA into shinyDashboard by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-17 09:51:28 +0200;
  • 38ac5da3 Merge branch 'rcastelo:master' into shinyDashboard by Pablo Rodriguez <53177189+pablo-rodr-bio2@users.noreply.github.com> 2021-05-14 07:31:44 -0400;
  • 7c64d7b8 beautifying UI by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-14 05:37:52 -0400;
  • 85dbafce Updated vignette. by [rcastelo] <[robert.castelo@upf.edu]> 2021-05-13 18:53:11 +0200;
  • 002d7c71 added css for title and btns by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-13 07:26:15 -0400;
  • 21b1ef4f Merge remote-tracking branch 'upstream/master' by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-13 07:11:28 -0400;
  • 8a98ef4f Merge remote-tracking branch 'upstream/master' by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-12 09:27:58 +0200;
  • 32aee6be bump version by Robert Castelo <robert.castelo@upf.edu> 2021-05-11 18:25:49 +0200;
  • b56bfecf changed version by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-11 17:31:56 +0200;
  • 80ded0b1 Merge branch 'pablo-rodr-bio2-shinyDashboard' by Robert Castelo <robert.castelo@upf.edu> 2021-05-11 13:42:56 +0200;
  • a3216e79 Merge branch 'shinyDashboard' of https://github.com/pablo-rodr-bio2/GSVA into pablo-rodr-bio2-shinyDashboard by Robert Castelo <robert.castelo@upf.edu> 2021-05-11 13:20:49 +0200;
  • 8f6a756d added css ad shinydashboard by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-11 12:25:57 +0200;
  • c4945707 added css to cls and dwn btn by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-07 04:18:33 -0400;
  • 8874e35d still bad buttons by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-06 19:51:11 +0200;
  • b7783fd5 proving dashboards by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-05 08:01:52 +0200;
  • baad268a Merge branch 'pablo-rodr-bio2-sparseMatrix' by Robert Castelo <robert.castelo@upf.edu> 2021-05-04 15:42:50 +0200;
  • dd35d7d6 removed filterFeatureSparse() by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-03 20:16:40 +0200;
  • cf4f7ed7 removed filterFeatureSparse() by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-05-03 14:24:35 +0200;
  • 7c02ee08 Merge branch 'pablo-rodr-bio2-shinyUpdate' by [rcastelo] <[robert.castelo@upf.edu]> 2021-04-30 17:51:44 +0200;
  • 0a4c5ab4 Merge branch 'shinyUpdate' of https://github.com/pablo-rodr-bio2/GSVA into pablo-rodr-bio2-shinyUpdate by [rcastelo] <[robert.castelo@upf.edu]> 2021-04-30 17:18:40 +0200;
  • 74f0a078 added minor css to title by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-30 12:26:32 +0200;
  • 9ccb943b method in x label, args change with method by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-29 19:41:04 +0200;
  • 663f06af changed x label in plot1 and plot2 for selected method by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-28 09:59:37 +0200;
  • b574e85a resets plot3 when plot1 is clicked by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-28 09:15:54 +0200;
  • 262758d0 Merge branch 'pablo-rodr-bio2-shinyUpdate' by Robert Castelo <robert.castelo@upf.edu> 2021-04-27 09:50:11 +0200;
  • a80936d3 hidden 'genesets' tab and rearrange buttons by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-26 21:22:13 +0200;
  • 96a81584 modularizing and fixing bugs by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-26 12:56:26 +0200;
  • 30597d38 added shinytest by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-23 12:14:15 +0200;
  • 9a110347 rebased by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-23 00:05:25 +0200;
  • 0279b2a6 rebased by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-23 00:03:49 +0200;
  • 9a34d10e rebased by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-22 18:03:37 +0200;
  • 81a33b3a adding comments to code by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-20 15:46:22 +0200;
  • fd2b043c reset plo2 and plot3 with js when btn by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 20:19:16 +0200;
  • 6955fab9 reset plo2 and plot3 with js when btn by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 20:17:01 +0200;
  • 055f2806 modified imports in igsva() by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 13:20:20 +0200;
  • 0f887afb modified imports in igsva() by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 12:16:43 +0200;
  • 359519f7 fixing btn and plot2 errors by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-15 16:12:31 +0200;
  • e32501d2 hide dwn and close btns by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-13 19:00:38 +0200;
  • 0b192b11 modules in shinyApp by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-12 21:45:21 +0200;
  • ca2b622a modules in shinyApp by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-12 21:41:34 +0200;
  • 8a635107 Add org.Hs.eg.db to suggests. by [rcastelo] <[robert.castelo@upf.edu]> 2021-04-21 15:20:31 +0200;
  • 61184714 Replaced markdown by rmarkdown in suggests. by [rcastelo] <[robert.castelo@upf.edu]> 2021-04-21 13:57:02 +0200;
  • 8dfc5494 hide GeneSets tabpanel by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-21 12:52:26 +0200;
  • 64de0b0d hide GeneSets tabpanel by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-21 12:51:28 +0200;
  • eeb542e4 adding comments to code by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-20 15:46:22 +0200;
  • a6a9030c reset plo2 and plot3 with js when btn by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 20:19:16 +0200;
  • a3844f3d reset plo2 and plot3 with js when btn by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 20:17:01 +0200;
  • 464936e4 modified imports in igsva() by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 13:20:20 +0200;
  • d943a959 modified imports in igsva() by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-19 12:16:43 +0200;
  • 0c6ecf40 fixing btn and plot2 errors by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-15 16:12:31 +0200;
  • 98c1bac6 hide dwn and close btns by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-13 19:00:38 +0200;
  • fdf49504 modules in shinyApp by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-12 21:45:21 +0200;
  • f2b69b61 modules in shinyApp by pablo-rodr-bio2 <pablo.rodriguez.bio2@gmail.com> 2021-04-12 21:41:34 +0200;
  • 53a9b5e5 Updated vignette. by Robert Castelo <robert.castelo@upf.edu> 2021-03-30 22:12:25 +0200;