June 3, 2021
View61b842e5

Bugfix to enforce DelayedMatrixStats::rowSds(), with matrixStats::rowSds() behind the scenes, giving an exact zero where base sd() would also give an exact zero. See https://github.com/rcastelo/GSVA/issues/54 and https://github.com/HenrikBengtsson/matrixStats/issues/204

[rcastelo] authored on 03/06/2021 15:42:11
May 3, 2021
Viewcf4f7ed7

removed filterFeatureSparse()

pablo-rodr-bio2 authored on 03/05/2021 12:24:35
February 3, 2021
View0093798f

Replaced fastmatch::fmatch() by IRanges::match,CharacterList-method after disscussion at https://github.com/rcastelo/GSVA/issues/39

Robert Castelo authored on 03/02/2021 16:09:12
January 22, 2021
View09235a22

Fixed call to fastmatch::fmatch() to avoid that this call modifies rownames of input expression matrices. Use this opportunity to factor out relevant code.

Robert Castelo authored on 22/01/2021 11:27:10
November 20, 2020
View9136daba

added hdf5 support for plage method

pablo-rodr-bio2 authored on 20/11/2020 18:38:41
November 19, 2020
View3147dc19

adding support to DelayedArray backend

pablo-rodr-bio2 authored on 19/11/2020 10:20:24
November 9, 2020
Viewb4f13708

adding dgCMatrix support to method plage

pablo-rodr-bio2 authored on 09/11/2020 11:11:55
November 2, 2020
View763cb48d

adding dgCMatrix/list support

pablo-rodr-bio2 authored on 02/11/2020 18:20:08
December 16, 2019
View8de45582

Added methods to take expression data in a SummarizedExperiment object.

Robert Castelo authored on 16/12/2019 11:46:25