April 29, 2021
View9ccb943b

method in x label, args change with method

pablo-rodr-bio2 authored on 29/04/2021 17:41:04
March 3, 2021
View98d91f50

Some fixes removing the dependency of fastmatch and other minor issues.

[rcastelo] authored on 03/03/2021 11:07:14
February 9, 2021
Viewd5ee4c65

Fixed gsva() method for signature matrix and GeneSetCollection.

Robert Castelo authored on 09/02/2021 12:11:44
February 5, 2021
Viewb77eaecf

Started updating the vignette.

Robert Castelo authored on 05/02/2021 18:07:16
February 3, 2021
View0093798f

Replaced fastmatch::fmatch() by IRanges::match,CharacterList-method after disscussion at https://github.com/rcastelo/GSVA/issues/39

Robert Castelo authored on 03/02/2021 16:09:12
View6040bc0e

Fixed wrong call to .mapGeneSetsToFeatures when gene sets are given in a GeneSetCollection object.

Robert Castelo authored on 03/02/2021 12:32:10
January 22, 2021
View09235a22

Fixed call to fastmatch::fmatch() to avoid that this call modifies rownames of input expression matrices. Use this opportunity to factor out relevant code.

Robert Castelo authored on 22/01/2021 11:27:10
January 13, 2021
View6ddafc12

fixing little bug, changing function's duplicated name

pablo-rodr-bio2 authored on 13/01/2021 16:47:39
November 20, 2020
View9136daba

added hdf5 support for plage method

pablo-rodr-bio2 authored on 20/11/2020 18:38:41
November 13, 2020
View6e254afc

adding sparse support to method ssgsea

pablo-rodr-bio2 authored on 13/11/2020 12:45:26
November 11, 2020
Viewddccdfa5

adding sparse support to zscore method

pablo-rodr-bio2 authored on 11/11/2020 19:13:24
November 10, 2020
View5166605f

adding sparse support to method plage

pablo-rodr-bio2 authored on 10/11/2020 11:04:28
November 9, 2020
Viewb4f13708

adding dgCMatrix support to method plage

pablo-rodr-bio2 authored on 09/11/2020 11:11:55
November 2, 2020
View763cb48d

adding dgCMatrix/list support

pablo-rodr-bio2 authored on 02/11/2020 18:20:08
October 29, 2020
Viewe48a4a3c

adding SingleCellExperiment support

pablo-rodr-bio2 authored on 29/10/2020 11:43:14