Browse code

new ui updates in dashboard

pablo-rodr-bio2 authored on 17/05/2021 18:06:45
Showing3 changed files

... ...
@@ -11,7 +11,7 @@ Imports: methods, stats, utils, graphics, S4Vectors, IRanges,
11 11
          BiocParallel, SingleCellExperiment, sparseMatrixStats, DelayedArray,
12 12
          DelayedMatrixStats, HDF5Array, BiocSingular
13 13
 Suggests: BiocGenerics, RUnit, BiocStyle, knitr, rmarkdown, limma, RColorBrewer,
14
-          org.Hs.eg.db, genefilter, edgeR, GSVAdata, shiny, shinythemes, ggplot2,
14
+          org.Hs.eg.db, genefilter, edgeR, GSVAdata, shiny, shinydashboard, ggplot2,
15 15
           data.table, plotly, future, promises, shinybusy, shinyjs
16 16
 Description: Gene Set Variation Analysis (GSVA) is a non-parametric, unsupervised method for estimating variation of gene set enrichment through the samples of a expression data set. GSVA performs a change in coordinate systems, transforming the data from a gene by sample matrix to a gene-set by sample matrix, thereby allowing the evaluation of pathway enrichment for each sample. This new matrix of GSVA enrichment scores facilitates applying standard analytical methods like functional enrichment, survival analysis, clustering, CNV-pathway analysis or cross-tissue pathway analysis, in a pathway-centric manner.
17 17
 License: GPL (>= 2)
... ...
@@ -210,9 +210,12 @@ function(input, output, session) {
210 210
   
211 211
   # TEXT3
212 212
   output$text3 <- renderUI({
213
-    HTML(paste("<br/>", "\t To see the Kernel Density Estimation of genes of 
214
-    any given Gene Set in this Sample,  click on any point in this plot and a
215
-    second plot will appear bellow it", "<br/>", sep="<br/>"))
213
+    tagList(
214
+      br(),
215
+      div("To see the Kernel Density Estimation of genes of any given
216
+      Gene Set in this Sample,  click on any point in this plot and a
217
+      second plot will appear bellow it", style = "text-align: center;")
218
+    )
216 219
   })
217
-
220
+  
218 221
 }
... ...
@@ -75,14 +75,3 @@
75 75
   padding: 5px 5px 5px 5px;
76 76
   margin: 5px 5px 5px 5px;
77 77
 }
78
-
79
-
80
-/**
81
-.main-header {
82
-  max-height: 75px;
83
-}
84
-
85
-.main-header .logo {
86
-  max-height: 75px;
87
-}
88
-**/
89 78
\ No newline at end of file