@@ -1,5 +1,5 @@

 Package: GSVA

-Version: 1.39.21

+Version: 1.39.22

 Title: Gene Set Variation Analysis for microarray and RNA-seq data

 Authors@R: c(person("Justin", "Guinney", role=c("aut", "cre"), email="justin.guinney@sagebase.org"),

              person("Robert", "Castelo", role="aut", email="robert.castelo@upf.edu"),

@@ -42,7 +42,8 @@ bibliography: GSVA.bib

 ```{r setup, include=FALSE}

 options(width=80)

 knitr::opts_chunk$set(collapse=TRUE,

-                      message=FALSE)

+                      message=FALSE,

+                      comment="")

 ```

 # Quick start

@@ -271,7 +272,9 @@ as illustrated before in the quick start section, where we defined a toy collect

 of three gene sets stored in a list object called `gs`:

 ```{r}

-gs

+class(gs)

+length(gs)

+head(lapply(gs, head))

 ```

 Using a Bioconductor organism-level package such as