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modified imports in igsva()

pablo-rodr-bio2 authored on 19/04/2021 10:16:43
Showing2 changed files

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@@ -2,7 +2,7 @@ igsva <- function() {
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   shinydeps <- c("shiny", "shinythemes", "ggplot2",
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                  "data.table", "plotly", "future",
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-                 "shinyjs", "shinybusy")
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+                 "shinyjs", "shinybusy", "limma")
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   maskshinydeps <- shinydeps %in% installed.packages()
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   if (any(!maskshinydeps))
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     stop(sprintf("Please install the following packages to use the GSVA WebApp:\n\n  %s\n",
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@@ -20,22 +20,24 @@ igsva <- function() {
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                       vars="ggplot")
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   namespaceImportFrom(self=getNamespace("base"),
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-                      ns=getNamespace("data.table"),
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-                      vars="as.data.table")
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+                      ns=getNamespace("data.table"))
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   namespaceImportFrom(self=getNamespace("base"),
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                       ns=getNamespace("plotly"),
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                       vars=c("ggplotly", "event_data", "style"))
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-  
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+
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   namespaceImportFrom(self=getNamespace("base"),
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                       ns=getNamespace("future"))
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-  
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+
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   namespaceImportFrom(self=getNamespace("base"),
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                       ns=getNamespace("shinyjs"))
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-  
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+
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   namespaceImportFrom(self=getNamespace("base"),
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                       ns=getNamespace("shinybusy"))
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+  namespaceImportFrom(self=getNamespace("base"),
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+                      ns=getNamespace("limma"))
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+
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   appDir <- system.file("shinyApp", package="GSVA")
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   if (appDir == "")
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     stop("The GSVA Shiny app cannot be found within the package.")
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new file mode 100644
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@@ -0,0 +1,13 @@
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+name: shinyApp
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+title: shinyApp
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+username:
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+account: prodriguez-bio2
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+server: shinyapps.io
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+hostUrl: https://api.shinyapps.io/v1
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+appId: 3971711
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+bundleId: 4476074
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+url: https://prodriguez-bio2.shinyapps.io/shinyapp/
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+when: 1618503477.40691
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+lastSyncTime: 1618503477.40694
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+asMultiple: FALSE
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+asStatic: FALSE