igsva <- function() { shinydeps <- c("shiny", "shinythemes", "ggplot2", "data.table", "plotly", "future", "shinyjs", "shinybusy", "limma") maskshinydeps <- shinydeps %in% installed.packages() if (any(!maskshinydeps)) stop(sprintf("Please install the following packages to use the GSVA WebApp:\n\n %s\n", paste(shinydeps[!maskshinydeps], collapse=", "))) # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("shiny")) # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("shinythemes"), # vars="shinytheme") # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("ggplot2"), # vars="ggplot") # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("data.table")) # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("plotly"), # vars=c("ggplotly", "event_data", "style")) # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("future")) # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("shinyjs")) # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("shinybusy")) # # namespaceImportFrom(self=getNamespace("base"), # ns=getNamespace("limma")) appDir <- system.file("shinyApp", package="GSVA") if (appDir == "") stop("The GSVA Shiny app cannot be found within the package.") # runWebApp <- get("runApp", mode="function") # runWebApp(appDir) shiny::runApp(appDir) }