1. GSEAmining
  2. Graph
Graph of GSEAmining
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  • 8c8d1dc (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:20:29 -0400;
  • 53b7350 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:20:29 -0400;
  • dd34098 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:22:24 -0400;
  • c11832b (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:22:24 -0400;
  • cf9bcc9 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:06:35 +0000;
  • 9a58d1c (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:06:35 +0000;
  • 0b49dae bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:00:59 +0000;
  • 19dee20 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:00:59 +0000;
  • 2471cfb bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:53:48 +0000;
  • 862eab4 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:53:48 +0000;
  • a385740 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:58:51 -0400;
  • 098fd7e (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:58:51 -0400;
  • 7604f2c Description update. by Oriol Arqués <oriol.arques@gmail.com> 2020-07-16 18:46:16 +0200;
  • 70e1969 Version bump to 1.0.0 by Oriol Arqués <oriol.arques@gmail.com> 2020-07-16 18:41:52 +0200;
  • 7f71f04 version bump by Oriol Arqués <oriol.arques@gmail.com> 2020-07-12 18:42:14 +0200;
  • ade40b9 Fixed mistake in the title. by Oriol Arqués <oriol.arques@gmail.com> 2020-07-12 18:18:15 +0200;
  • 656db4a Fixed mistake in the title by Oriol Arqués <oriol.arques@gmail.com> 2020-07-12 18:15:52 +0200;
  • f255a3a Version bump by Oriol Arqués <oriol.arques@gmail.com> 2020-06-12 12:28:40 +0200;
  • 675f2d6 updated description by Oriol Arqués <oriol.arques@gmail.com> 2020-06-12 12:27:41 +0200;
  • d540f9e Bioconductor revision. Inclusion of unit tests. Update in Description, Readme and Vignette (change of name). by Oriol Arqués <oriol.arques@gmail.com> 2020-06-12 12:18:04 +0200;
  • 9d636c8 Bioconductor revision. Inclusion of unit tests. Update in Description, Readme and Vignette (change of name). by Oriol Arqués <oriol.arques@gmail.com> 2020-06-12 12:18:04 +0200;
  • 5ac9d8e Vignette update by Oriol Arqués <oriol.arques@gmail.com> 2020-05-20 19:29:12 +0200;
  • a0b39e8 Minor bug fixed in gm_dendplot regarding branches colors. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-18 14:31:33 +0200;
  • ddae355 Minor bug fixed in gm_dendplot regarding branches colors. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-18 14:21:29 +0200;
  • 69ded66 Minor bug fixed in gm_dendplot regarding branches colors. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-18 14:21:29 +0200;
  • b260329 Version bumped to 0.99.13 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-15 11:15:03 +0200;
  • 53c9824 Update Readme.md by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-15 11:13:15 +0200;
  • cb82649 Merge branch 'master' of https://github.com/oriolarques/GSEAmining by Oriol Arqués <oriol.arques@gmail.com> 2020-05-15 11:10:26 +0200;
  • bda8fea Readme update by Oriol Arqués <oriol.arques@gmail.com> 2020-05-15 11:10:04 +0200;
  • 78b0420 Version 0.99.12 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 19:21:05 +0200;
  • e31acd3 Uncommited GSEAmining.Rproj and .DS_Store . by Oriol Arqués <oriol.arques@gmail.com> 2020-05-07 19:20:28 +0200;
  • 1904e04 Version 0.99.11 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:57:42 +0200;
  • 5bda4a6 Version bump 0.99.20 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:55:30 +0200;
  • e25aea6 Version 0.99.2 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:52:57 +0200;
  • 3bfd076 Version 0.99.11 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:50:10 +0200;
  • 7b37d07 Version 0.99.1 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:49:10 +0200;
  • 9a0bc68 Version: 0.99.1 by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:28:38 +0200;
  • 0744574 Update DESCRIPTION by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:19:24 +0200;
  • 2443ec4 Update .gitignore by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-07 18:17:15 +0200;
  • 37415b6 Merge branch 'master' of https://github.com/oriolarques/GSEAmining by Oriol Arqués <oriol.arques@gmail.com> 2020-05-07 17:24:10 +0200;
  • e81d702 Change in gm_filter function. neg_NES and pos_NES have a default value of 1. README added installation section. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-07 16:53:14 +0200;
  • d34b14f Change in gm_filter function. neg_NES and pos_NES have a default value of 1 by Oriol Arqués <oriol.arques@gmail.com> 2020-05-07 16:53:14 +0200;
  • 1f6c86e Vignette update. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-07 16:28:18 +0200;
  • 0df9f2d Addition of the methods::is function to amend a warning in R CMD check. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-06 21:56:09 +0200;
  • 223aea3 Minor changes in README file. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-06 21:28:07 +0200;
  • de6120d Merge branch 'master' of https://github.com/oriolarques/GSEAmining by Oriol Arqués <oriol.arques@gmail.com> 2020-05-06 21:23:33 +0200;
  • 4823e95 Minor changes in the README file. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-06 21:02:59 +0200;
  • bd26d55 Improvements in the documentation of the different functions. Creation of the Vignette with the Bioconductor style. Introduction of the new function gm_filter to filter GSEA output and reduce the amount of gene sets to analyze. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-06 21:02:59 +0200;
  • 2daa232 Return value sentences missed a point to end the line. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-05 18:25:16 +0200;
  • 92aced7 Merge branch 'master' of https://github.com/oriolarques/GSEAmining by Oriol Arqués <oriol.arques@gmail.com> 2020-05-05 18:22:24 +0200;
  • 3cc8273 All warnings corrected and manuals updated with return values. Warning: 'No visible binding for global variable' resolved using rlang and '.data$' before all variables called in dplyr. by Oriol Arqués <oriol.arques@gmail.com> 2020-05-05 12:24:28 +0200;
  • f57120d Merge branch 'master' of https://github.com/oriolarques/GSEAmining by Oriol Arqués <oriol.arques@gmail.com> 2020-05-05 12:24:28 +0200;
  • e1681fe -Substituted stop_words as an object for a function, which is easier to implement in the code and allows it to be modified from the .R file more easily. - gm_dendplot marings modified. - gm_dendplot inclusion of two new parameters to control the height of the dendrogram and the length of the rectangles. - gm_dendplot: Elimination of text inclusion with the rectangles. by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-04 09:20:15 +0200;
  • 923061a Create LICENSE by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-04 09:20:15 +0200;
  • fe4710c Update README.md by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-03 15:33:43 +0200;
  • 1462865 Update README.md by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-03 15:32:38 +0200;
  • f92c8b6 delete example data by Oriol Arqués <oriol.arques@gmail.com> 2020-05-01 21:01:30 +0200;
  • cb071ff Update README.md by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-01 20:33:14 +0200;
  • 893263c Create README.md by Oriol Arqués <32706992+oriolarques@users.noreply.github.com> 2020-05-01 20:25:07 +0200;
  • ed4eb46 The function gm_enrichall has been changed by gm_enrichreport. The rest of the functions have been modified to incorporate intermediate functions so that part of the code is re-usable. These functions are clust_groups (to find and store the different clusters), clust_group_terms (to get the gene set terms) and clust_group_cores (to get the leadin edge enrichment). by Oriol Arqués <oriol.arques@gmail.com> 2020-05-01 15:27:25 +0200;
  • 2c8410f Introduction of the 5th function gm_enrichall, which makes the report of genesets wordclouds and leading edge barplots and puts one cluster per page in a pdf file. by Oriol Arqués <oriol.arques@gmail.com> 2020-04-30 21:54:07 +0200;
  • 4cdbabe Addition of the 3rd and 4th functions, gm_enrichterms (for gene set terms) and gm_enrichcores (for leading edge analysis) by Oriol Arqués <oriol.arques@gmail.com> 2020-04-30 15:24:02 +0200;
  • 4b9e2f3 First commitment. Includes the first two functions of the package, gm_clust & gm_dendplot by Oriol Arqués <oriol.arques@gmail.com> 2020-04-29 18:57:11 +0200;