1. GMRP
  2. DESCRIPTION
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bump x.y.z version to odd y following creation of RELEASE_3_17 branch

J Wokaty authored on 25/04/2023 15:02:39
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.28.0
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+Version: 1.29.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_17 branch

J Wokaty authored on 25/04/2023 15:02:39
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.27.0
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+Version: 1.28.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y following creation of RELEASE_3_16 branch

J Wokaty authored on 01/11/2022 15:18:01
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1 1 
 Package: GMRP
2 2 
 Type: Package
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 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.26.0
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+Version: 1.27.0
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_16 branch

J Wokaty authored on 01/11/2022 15:18:01
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1 1 
 Package: GMRP
2 2 
 Type: Package
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 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.25.0
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+Version: 1.26.0
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y following creation of RELEASE_3_15 branch

Nitesh Turaga authored on 26/04/2022 15:49:44
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 Package: GMRP
2 2 
 Type: Package
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 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.24.0
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+Version: 1.25.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_15 branch

Nitesh Turaga authored on 26/04/2022 15:49:44
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.23.0
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+Version: 1.24.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y following creation of RELEASE_3_14 branch

Nitesh Turaga authored on 26/10/2021 16:45:21
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 Package: GMRP
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 Type: Package
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 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.22.0
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+Version: 1.23.0
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_14 branch

Nitesh Turaga authored on 26/10/2021 16:45:21
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 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.21.0
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+Version: 1.22.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y following creation of RELEASE_3_13 branch

Nitesh Turaga authored on 19/05/2021 16:36:23
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.20.0
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+Version: 1.21.0
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_13 branch

Nitesh Turaga authored on 19/05/2021 16:36:23
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.19.0
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+Version: 1.20.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y following creation of RELEASE_3_12 branch

Nitesh Turaga authored on 27/10/2020 15:36:20
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 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.18.0
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+Version: 1.19.0
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_12 branch

Nitesh Turaga authored on 27/10/2020 15:36:20
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.17.0
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+Version: 1.18.0
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y following creation of RELEASE_3_11 branch

Nitesh Turaga authored on 27/04/2020 19:17:36
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.16.0
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+Version: 1.17.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_11 branch

Nitesh Turaga authored on 27/04/2020 19:17:36
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.15.0
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+Version: 1.16.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to odd y after creation of RELEASE_3_10 branch

Nitesh Turaga authored on 29/10/2019 17:43:15
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.14.0
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+Version: 1.15.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z version to even y prior to creation of RELEASE_3_10 branch

Nitesh Turaga authored on 29/10/2019 17:11:14
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
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-Version: 1.13.0
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+Version: 1.14.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z versions to odd y after creation of RELEASE_3_9 branch

Nitesh Turaga authored on 02/05/2019 16:15:50
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.12.0
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+Version: 1.13.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch

Nitesh Turaga authored on 02/05/2019 15:54:12
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.11.1
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+Version: 1.12.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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Undeprecated

- This was deprecated, then undeprecated, somehow they manage to recommit the deprecated status

lshep authored on 26/11/2018 14:33:59
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.11.0
4 
+Version: 1.11.1
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 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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@@ -16,4 +16,3 @@ Suggests: BiocStyle, BiocGenerics
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 LazyLoad: yes
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 biocViews: Sequencing, Regression, SNP
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 NeedsCompilation: no
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-PackageStatus: Deprecated
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bump x.y.z versions to odd y after creation of RELEASE_3_8 branch

vobencha authored on 30/10/2018 15:54:39
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.10.0
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+Version: 1.11.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch

vobencha authored on 30/10/2018 15:42:09
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.9.0
4 
+Version: 1.10.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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some message

y.tan authored on 12/05/2018 18:15:30
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Updating DESCRIPTION,ucscannot.R, and GMRP.Rnw files after syncing my Github and Bioconductor repos

y.tan authored on 12/05/2018 17:57:17
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@@ -12,7 +12,7 @@ Description: Perform Mendelian randomization analysis of multiple SNPs
12 12 
 License: GPL (>= 2)
13 13 
 Depends: R(>= 3.3.0),stats,utils,graphics, grDevices, diagram, plotrix,
14 14 
         base,GenomicRanges
15 
-Suggests: BiocStyle, BiocGenerics, VariantAnnotation
15 
+Suggests: BiocStyle, BiocGenerics
16 16 
 LazyLoad: yes
17 17 
 biocViews: Sequencing, Regression, SNP
18 18 
 NeedsCompilation: no
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bump x.y.z versions to odd y after creation of RELEASE_3_7 branch

vobencha authored on 30/04/2018 14:41:41
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.8.0
4 
+Version: 1.9.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch

vobencha authored on 30/04/2018 14:35:41
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.7.2
4 
+Version: 1.8.0
5 5 
 Date: 2018-04-15
6 6 
 Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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first commit

y.tan authored on 21/04/2018 19:57:54
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.7.1
5 
-Date: 2015-11-04
6 
-Author: Yuan-De Tan and Dajiang Liu
4 
+Version: 1.7.2
5 
+Date: 2018-04-15
6 
+Author: Yuan-De Tan
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
8 8 
 Description: Perform Mendelian randomization analysis of multiple SNPs
9 9 
         to determine risk factors causing disease of study and to
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Deprecate Package

lshep authored on 15/12/2017 14:19:38
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.7.0
4 
+Version: 1.7.1
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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@@ -16,3 +16,4 @@ Suggests: BiocStyle, BiocGenerics, VariantAnnotation
16 16 
 LazyLoad: yes
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 biocViews: Sequencing, Regression, SNP
18 18 
 NeedsCompilation: no
19 
+PackageStatus: Deprecated
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bump x.y.z versions to odd y after creation of RELEASE_3_6 branch

Hervé Pagès authored on 30/10/2017 16:54:19
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.6.0
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+Version: 1.7.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
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bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch

Hervé Pagès authored on 30/10/2017 16:41:14
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.5.0
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+Version: 1.6.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

bump x.y.z versions to odd y after creation of 3_5 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@129129 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 24/04/2017 19:50:57
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.4.0
4 
+Version: 1.5.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

bump x.y.z versions to even y prior to creation of 3_5 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@129126 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 24/04/2017 19:25:24
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.3.0
4 
+Version: 1.4.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

bump x.y.z versions to odd 'y' after creation of 3_4 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@122712 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 17/10/2016 19:10:43
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.2.0
4 
+Version: 1.3.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

bump x.y.z versions to even 'y' prior to creation of 3_4 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@122710 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 17/10/2016 18:45:06
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.1.0
4 
+Version: 1.2.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

bump version after creating 3.3 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@117081 bc3139a8-67e5-0310-9ffc-ced21a209358

Dan Tenenbaum authored on 03/05/2016 21:30:44
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 1.0.0
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+Version: 1.1.0
5 5 
 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
7 7 
 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

Bump versions prior to creation of 3.3 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@117079 bc3139a8-67e5-0310-9ffc-ced21a209358

Dan Tenenbaum authored on 03/05/2016 21:20:18
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1 1 
 Package: GMRP
2 2 
 Type: Package
3 3 
 Title: GWAS-based Mendelian Randomization and Path Analyses
4 
-Version: 0.99.2
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+Version: 1.0.0
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 Date: 2015-11-04
6 6 
 Author: Yuan-De Tan and Dajiang Liu
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 Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Browse code

Adding SpidermiR, DRIMSeq, debrowser, GMRP, ISoLDE, CountClust, OncoScore, AneuFinder, recoup, genphen, DEFormats, sscu

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GMRP@115200 bc3139a8-67e5-0310-9ffc-ced21a209358

Martin Morgan authored on 23/03/2016 22:36:02
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new file mode 100644
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1 
+Package: GMRP
2 
+Type: Package
3 
+Title: GWAS-based Mendelian Randomization and Path Analyses
4 
+Version: 0.99.2
5 
+Date: 2015-11-04
6 
+Author: Yuan-De Tan and Dajiang Liu
7 
+Maintainer: Yuan-De Tan <tanyuande@gmail.com>
8 
+Description: Perform Mendelian randomization analysis of multiple SNPs
9 
+        to determine risk factors causing disease of study and to
10 
+        exclude confounding variabels and perform path analysis to
11 
+        construct path of risk factors to the disease.
12 
+License: GPL (>= 2)
13 
+Depends: R(>= 3.3.0),stats,utils,graphics, grDevices, diagram, plotrix,
14 
+        base,GenomicRanges
15 
+Suggests: BiocStyle, BiocGenerics, VariantAnnotation
16 
+LazyLoad: yes
17 
+biocViews: Sequencing, Regression, SNP
18 
+NeedsCompilation: no