Package: GEOfastq
Type: Package
Title: Downloads ENA Fastqs With GEO Accessions
Version: 1.11.0
Authors@R: person("Alex", "Pickering", email="alexvpickering@gmail.com", 
                  role=c("cre", "aut"), 
                  comment = c(ORCID = "0000-0002-0002-6759"))
Description: GEOfastq is used to download fastq files from the European 
  Nucleotide Archive (ENA) starting with an accession from the Gene Expression 
  Omnibus (GEO). To do this, sample metadata is retrieved from GEO and the 
  Sequence Read Archive (SRA). SRA run accessions are then used to construct FTP
  and aspera download links for fastq files generated by the ENA.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
BugReports: https://github.com/alexvpickering/GEOfastq/issues
Imports:
  xml2,
  rvest,
  stringr,
  RCurl,
  doParallel,
  foreach,
  plyr
Suggests:
  BiocCheck,
  roxygen2,
  knitr,
  rmarkdown,
  testthat
biocViews:
  RNASeq,
  DataImport
VignetteBuilder: knitr