1. FGNet
  2. Graph
Graph of FGNet
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  • 728590a (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:29:22 -0400;
  • e418f5c (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:29:22 -0400;
  • f9df786 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:08:55 -0400;
  • 3298df0 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:08:55 -0400;
  • 2452088 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:16:52 +0000;
  • 211573f (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:16:52 +0000;
  • 3176d44 Solved missing 'mgTerms' error by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-08 11:11:55 +0200;
  • e3e32ad update dependency by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-04 20:34:05 +0200;
  • c9b184d remove Rgtk2 dependency by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-04 20:07:51 +0200;
  • f2c8dac bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:10:40 +0000;
  • 7938907 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:10:40 +0000;
  • 300c07f bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:01:32 +0000;
  • 11b6029 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:01:32 +0000;
  • 1a79127 Correct documentation links by Sara Aibar <sara.aibar@kuleuven.be> 2021-03-23 14:48:10 +0100;
  • 7971fa8 Remove links to fea_david() by Sara Aibar <sara.aibar@kuleuven.be> 2021-03-19 17:17:18 +0100;
  • 97d3a1a Update by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2021-03-13 15:05:12 +0100;
  • fe4b4e7 Remove RDavidWebservice dependency by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2021-03-09 12:16:15 +0100;
  • 0ecf9f5 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:53:42 -0400;
  • 92c6ba3 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:53:42 -0400;
  • cc83df9 Remove KEGG support by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-07-24 00:04:41 +0200;
  • 2f72b34 Solve "check" errors and warnings by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-07-23 23:42:54 +0200;
  • 720b29d (origin/RELEASE_3_11, RELEASE_3_11) commit by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-07-23 21:47:47 +0200;
  • 2bd6815 Solving errors/warnings by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-07-23 21:42:31 +0200;
  • aa9b769 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:37:14 +0000;
  • e13c51c bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:37:14 +0000;
  • 697f05c Updates for R 4.0 by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-03-17 14:12:14 +0100;
  • 1c0459b bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:37:12 -0400;
  • 96dbc29 (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:50 -0400;
  • 1bf2d9c bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:28 -0400;
  • 85a050d (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:46 -0400;
  • 72c43b1 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:32 -0400;
  • f26ca32 (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:52 -0400;
  • dc9bf7f Missing bracket by Sara Aibar <sara.aibar@kuleuven.vib.be> 2018-10-22 23:36:03 +0200;
  • aa67ab9 Merge branch 'master' of git.bioconductor.org:packages/FGNet by Sara Aibar <sara.aibar@kuleuven.vib.be> 2018-09-27 23:11:20 +0200;
  • c3c0118 solving connection error by Sara Aibar <sara.aibar@kuleuven.vib.be> 2018-09-27 23:08:35 +0200;
  • 85ffaaa solving connection error by Sara Aibar <sara.aibar@kuleuven.vib.be> 2018-09-27 23:08:35 +0200;
  • 511e6e7 v 3.15: Deprecate plotKegg() by Sara Aibar <sara.aibar@kuleuven.vib.be> 2018-09-16 23:15:06 +0200;
  • ab9a9f5 replace BiocInstaller biocLite mentions with BiocManager by LiNk-NY <mramos09@gmail.com> 2018-08-30 13:48:34 -0400;
  • 38924d5 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:39 -0400;
  • 2ce55ef (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:31 -0400;
  • a395dd4 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:58 -0400;
  • 62559b4 (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:40:09 -0400;
  • 0d86f88 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • e0fa2c3 (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 0fca04c bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • f868d47 bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • f38e2c1 (origin/RELEASE_3_4, RELEASE_3_4) Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • 28353c6 bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • 427955d (origin/RELEASE_3_3, RELEASE_3_3) Version bump to trigger package rebuilding now that purl()'ing issue has been correctly identified. knitr does not create purl()'ed (Stangle equivalent) .R files if _R_CHECK_TIMINGS_ is set, which the build system was setting. Now it's not set, so these .R files are now created. See https://github.com/yihui/knitr/issues/1212 for more. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-15 20:18:19 +0000;
  • bbf1bc9 Version bump to trigger package rebuilding now that purl()'ing issue has been correctly identified. knitr does not create purl()'ed (Stangle equivalent) .R files if _R_CHECK_TIMINGS_ is set, which the build system was setting. Now it's not set, so these .R files are now created. See https://github.com/yihui/knitr/issues/1212 for more. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-15 20:14:22 +0000;
  • b766899 Bump version of all packages that use knitr for vignettes. This is because of an issue (now fixed) in knitr which failed to create purl()'ed R files from vignette sources and include them in the package. This version bump will cause these packages to propagate with those R files included. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-11 23:15:25 +0000;
  • 59beefc Bump version of all packages that use knitr for vignettes. This is because of an issue (now fixed) in knitr which failed to create purl()'ed R files from vignette sources and include them in the package. This version bump will cause these packages to propagate with those R files included. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-11 23:05:31 +0000;
  • 659e8ee bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • 0e0992f Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • dbbc3c6 Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • 53ad50d Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • 879854b (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • a0b669f Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • 9c4343a Update to 3.3.7 by Sara Aibar <saibar@usal.es> 2015-10-05 17:38:20 +0000;
  • a231de9 Update to 3.3.6 by Sara Aibar <saibar@usal.es> 2015-09-29 22:13:31 +0000;
  • f972aa7 Update to 3.3.5 (Main changes: compatibility with DAVID's https) by Sara Aibar <saibar@usal.es> 2015-09-28 23:54:41 +0000;
  • f5b3011 Update to 3.3.5 (Main changes: compatibility with DAVID's https) by Sara Aibar <saibar@usal.es> 2015-09-28 23:09:23 +0000;
  • aef7434 (origin/RELEASE_3_1, RELEASE_3_1) DAVID SSL warning... by Sara Aibar <saibar@usal.es> 2015-08-18 12:41:10 +0000;
  • 1c9b253 DAVID SSL warning... by Sara Aibar <saibar@usal.es> 2015-08-18 12:33:25 +0000;
  • 7a93992 Updated for compatibility with igraph 1.0 and changes in DAVID by Sara Aibar <saibar@usal.es> 2015-08-16 15:16:21 +0000;
  • 75b7ba5 3.3.4 Compatibility with igraph 1.0 and updates to DAVID by Sara Aibar <saibar@usal.es> 2015-08-16 15:06:12 +0000;
  • e85597c 3.2.2 Bugfix: Error in fill nodes colorscale by Sara Aibar <saibar@usal.es> 2015-06-17 14:42:36 +0000;
  • a1d71b8 3.3.3 Bugfix: Error in fill nodes colorscale by Sara Aibar <saibar@usal.es> 2015-06-17 14:36:21 +0000;
  • c4e0761 Citation update by Sara Aibar <saibar@usal.es> 2015-05-13 12:06:44 +0000;
  • 0a682d9 Citation update by Sara Aibar <saibar@usal.es> 2015-05-13 12:01:04 +0000;
  • bba3c97 3.3.1 Citation update by Sara Aibar <saibar@usal.es> 2015-05-05 15:08:05 +0000;
  • 3b8dada Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • d9de4b8 Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • 8b05192 Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • 467409a Updated citation by Sara Aibar <saibar@usal.es> 2015-02-09 16:38:35 +0000;
  • b3df386 (origin/RELEASE_3_0) Added citation by Sara Aibar <saibar@usal.es> 2015-02-09 16:38:06 +0000;
  • 23e695d Added citation by Sara Aibar <saibar@usal.es> 2015-02-05 17:27:49 +0000;
  • 11ae919 3.0.7: Added citation by Sara Aibar <saibar@usal.es> 2015-02-05 17:26:33 +0000;
  • 26d99db 3.1.10 Node size and expression improvements by Sara Aibar <saibar@usal.es> 2014-12-01 13:35:16 +0000;
  • 40440ab 3.1.10 Node size and expression improvements by Sara Aibar <saibar@usal.es> 2014-12-01 12:10:33 +0000;
  • 5f0146e Added data/GOEvidenceCodes.RData, node color bug with missign values by Sara Aibar <saibar@usal.es> 2014-11-27 16:35:30 +0000;
  • 4bd5e4d 3.1.9 GO evidence. Bugfix(fea2incidMat filtering) by Sara Aibar <saibar@usal.es> 2014-11-26 18:48:29 +0000;
  • e8890d4 3.0.6 Bugfix: fea2incidMat - Filtering negative values by Sara Aibar <saibar@usal.es> 2014-11-26 18:21:33 +0000;
  • af0f0f7 3.1.8 Added argument 'clustMethod' to 'clustersDistance' and changed default clustering method to 'average' by Sara Aibar <saibar@usal.es> 2014-11-25 11:32:40 +0000;
  • a167fad 3.1.7 bufix report: '../' in windows by Sara Aibar <saibar@usal.es> 2014-10-29 09:57:04 +0000;
  • b1cd11d 3.0.5 report: '../' in windows by Sara Aibar <saibar@usal.es> 2014-10-29 09:55:55 +0000;
  • 3cd06b6 Added 'notrun' to ..-package.Rd by Sara Aibar <saibar@usal.es> 2014-10-27 21:53:15 +0000;
  • 75cb3a0 plotKegg: trycatch in download by Sara Aibar <saibar@usal.es> 2014-10-24 22:20:15 +0000;
  • 23aa411 plotKegg: trycatch in download by Sara Aibar <saibar@usal.es> 2014-10-24 22:19:38 +0000;
  • fdf58d3 Vignette update by Sara Aibar <saibar@usal.es> 2014-10-24 17:00:14 +0000;
  • 344cefc Vignette update by Sara Aibar <saibar@usal.es> 2014-10-24 16:59:58 +0000;
  • 6ce1ddb Vignette update by Sara Aibar <saibar@usal.es> 2014-10-24 16:59:44 +0000;
  • 43b14ec Vignette update by Sara Aibar <saibar@usal.es> 2014-10-24 16:59:20 +0000;
  • eaa89dd typo: betweenness by Sara Aibar <saibar@usal.es> 2014-10-22 20:17:37 +0000;
  • dce1469 typo: betweenness by Sara Aibar <saibar@usal.es> 2014-10-22 20:14:06 +0000;
  • 28e9936 date update by Sara Aibar <saibar@usal.es> 2014-10-22 18:06:32 +0000;
  • 17abf36 date update by Sara Aibar <saibar@usal.es> 2014-10-22 18:06:07 +0000;
  • 61beaf3 3.0.1 HTML vignette and minor typos and bugfixes by Sara Aibar <saibar@usal.es> 2014-10-22 17:24:19 +0000;
  • 13f4de6 3.1.4 Typo: betweenness by Sara Aibar <saibar@usal.es> 2014-10-22 16:57:57 +0000;
  • df20ff8 3.1.4 Typo: betweenness by Sara Aibar <saibar@usal.es> 2014-10-22 16:44:58 +0000;