# Generated by roxygen2: do not edit by hand exportClasses(BSDMC) exportMethods("methLevels<-") exportMethods("methReads<-") exportMethods("totalReads<-") exportMethods(cBSDMC) exportMethods(combine) exportMethods(findDMCFB) exportMethods(methLevels) exportMethods(methReads) exportMethods(plotDMCFB) exportMethods(readBismark) exportMethods(totalReads) import(BiocParallel) import(GenomicRanges) import(MASS) import(S4Vectors) import(SummarizedExperiment) import(graphics) import(methods) import(rtracklayer) importFrom(IRanges,IRanges) importFrom(arm,bayesglm) importFrom(benchmarkme,get_ram) importFrom(data.table,is.data.table) importFrom(fastDummies,dummy_cols) importFrom(graphics,abline) importFrom(graphics,axis) importFrom(graphics,layout) importFrom(graphics,legend) importFrom(graphics,lines) importFrom(graphics,par) importFrom(graphics,points) importFrom(graphics,segments) importFrom(matrixStats,colQuantiles) importFrom(matrixStats,rowVars) importFrom(speedglm,speedglm) importFrom(splines,ns) importFrom(stats,as.formula) importFrom(stats,binomial) importFrom(stats,coef) importFrom(stats,coefficients) importFrom(stats,contrasts) importFrom(stats,glm) importFrom(stats,logLik) importFrom(stats,median) importFrom(tibble,as_tibble) importFrom(tibble,is_tibble) importFrom(utils,combn) importFrom(utils,memory.size)