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  • b48cd43 (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:05:25 -0400;
  • 0878c60 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:05:25 -0400;
  • 8e709bb bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:06:25 +0000;
  • 9d2c152 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:06:25 +0000;
  • b2df823 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:57:33 +0000;
  • c3c8b03 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:57:33 +0000;
  • 4ae108c bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:46:48 +0000;
  • 49e7998 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:46:48 +0000;
  • 25d2d6f bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:39:35 -0400;
  • 7c7919a (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:39:35 -0400;
  • f804bad bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:23:38 +0000;
  • 7aad6da (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:23:38 +0000;
  • 71d81d6 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:35:21 -0400;
  • e7dd55e (origin/RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:18 -0400;
  • b431032 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:00 -0400;
  • 111f580 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:19 -0400;
  • ee07fdd bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:29 -0400;
  • b79d101 (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:46 -0400;
  • 6a08f17 replace BiocInstaller biocLite mentions with BiocManager by LiNk-NY <mramos09@gmail.com> 2018-08-30 13:47:35 -0400;
  • 0f862b4 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:38 -0400;
  • 9a9ad11 (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:15 -0400;
  • f0ab15c bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:11 -0400;
  • 59d997c (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:39:31 -0400;
  • e3ac789 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • 0eb68f5 (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 534376b bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • da06191 bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • 4ef060f (origin/RELEASE_3_4, RELEASE_3_4) Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • ec2e491 bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • 10330cd mark as unsupported on non-Linux like NCIgraph which DEGraph depends on by Herve Pages <hpages@fhcrc.org> 2016-09-01 00:24:35 +0000;
  • 529f2f3 update DESCRIPTION / CITATION files by Martin Morgan <mtmorgan@fhcrc.org> 2016-08-26 20:37:20 +0000;
  • 8847b7f LJ by Laurent Jacob <laurent.jacob@gmail.com> 2016-06-10 09:25:55 +0000;
  • a7f700a bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • 93b86fc (origin/RELEASE_3_3, RELEASE_3_3) Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • 2707f2c Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • f11b689 Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • 179422f (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • 342975d Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • a364a72 Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • 49deee0 (origin/RELEASE_3_1, RELEASE_3_1) Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • a024a77 Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • a66f184 Bumping versions after creating 3.0 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:47:41 +0000;
  • 1e9d6ee (origin/RELEASE_3_0) Creating branch for BioC 3.0 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:46:02 +0000;
  • 31219af Bump package versions prior to creating the 3.0 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:38:33 +0000;
  • e0de9db biocViews update by Sonali Arora <sarora@fhcrc.org> 2014-05-20 00:31:49 +0000;
  • 2045e1b Second version bump after creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:21:21 +0000;
  • 86ea2ed (origin/RELEASE_2_14, RELEASE_2_14) Creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:17:46 +0000;
  • 3696a56 First version bump prior to creating 2.14 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:07:21 +0000;
  • 8cada10 modify to new biocViews to DESCRIPTION file by Sonali Arora <sarora@fhcrc.org> 2014-03-04 22:12:21 +0000;
  • 2ef396f rename inst/doc to vignettes and bump version by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-11-01 20:15:51 +0000;
  • f88114e bump version after release branch has been created by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:47:19 +0000;
  • 44b6ef5 (origin/RELEASE_2_13, RELEASE_2_13) Creating branch for BioC 2.13 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:43:43 +0000;
  • fd3e8e8 bump versions prior to creating BioC 2.13 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:29:21 +0000;
  • 2259a46 Bump y in version x.y.z to odd number in devel by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 22:06:11 +0000;
  • 175ddf0 (origin/RELEASE_2_12, RELEASE_2_12) Creating branch for BioC 2.12 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:56:22 +0000;
  • be2a8f0 bump y of x.y.z version number for BioC 2.12 release by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:32:27 +0000;
  • 4d5cfda bump package versions after creating 2.11 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:43:56 +0000;
  • 746705d (origin/RELEASE_2_11, RELEASE_2_11) Creating branch for BioC 2.11 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:37:11 +0000;
  • 94ee3b2 Bump all packages before creating 2.11 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:16:24 +0000;
  • 5b6e861 re-saved to avoid warning by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-09-20 22:46:25 +0000;
  • d40998e Don't set attributes on graph objects (it invalidates them); instead, add items to the graphData slot. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-09-12 17:13:06 +0000;
  • 675956d Fixed bug: data[m,] becomes data[m,,drop=FALSE] to deal with the case where length(m)=1 by Laurent Jacob <laurent.jacob@gmail.com> 2012-06-09 06:31:29 +0000;
  • 1414eb0 updated serialized graph objects by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-05-22 17:53:59 +0000;
  • 763fd1d updated serialized graph objects with updateGraph() by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-05-18 19:44:01 +0000;
  • b8f8249 updated biocViews by Paul Shannon <pshannon@fhcrc.org> 2012-04-27 19:19:08 +0000;
  • b5b54e7 bumped version numbers after creating 2.10 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:15:56 +0000;
  • 6aa3eca (origin/RELEASE_2_10) Creating branch for BioC 2.10 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:10:45 +0000;
  • 61ef934 first version bump prior to creating 2.10 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:05:02 +0000;
  • da1656b version bump for start of 2.10 development cycle by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-10-31 23:12:28 +0000;
  • 5a4323f (origin/RELEASE_2_9, RELEASE_2_9) Creating branch for BioC 2.9 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-10-31 23:05:58 +0000;
  • 3dd1e95 bumped package version numbers prior to creating 2.9 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-10-31 22:59:03 +0000;
  • bd1f5ad done with testing new login. by Pierre Neuvial <pierre.neuvial@curie.fr> 2011-10-27 20:38:28 +0000;
  • 77f2436 testing new login by Pierre Neuvial <pierre.neuvial@curie.fr> 2011-10-27 20:38:06 +0000;
  • c7dd842 Added NCIgraph to Imports. by Pierre Neuvial <pierre.neuvial@curie.fr> 2011-10-23 21:49:37 +0000;
  • 04e3c61 PN: minor update by Pierre Neuvial <pierre.neuvial@curie.fr> 2011-10-19 20:16:49 +0000;
  • cc3e62a PN: Removed R/is.NCIgraph.R which is already in package NCIgraph. by Pierre Neuvial <pierre.neuvial@curie.fr> 2011-10-19 08:14:07 +0000;
  • bd4024b Now loading "Rgraphviz" explicitly whenever it was previously done implicitly by "KEGGgraph". by Pierre Neuvial <pierre.neuvial@curie.fr> 2011-10-17 21:22:04 +0000;
  • 1101557 Adds AGDEX to the repos. by Marc Carlson <mcarlson@fhcrc.org> 2011-10-15 00:24:45 +0000;
  • f98ec06 Bumped version numbers again for new BioC 2.9 devel cycle. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-04-13 22:36:43 +0000;
  • d9cb961 (origin/RELEASE_2_8, RELEASE_2_8) Creating branch for BioC 2.8 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-04-13 22:32:21 +0000;
  • 0b05b90 Bumped version numbers for BioC 2.8 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-04-13 22:27:35 +0000;
  • 919f993 LJ: Bug fix, removed NCIgraph dependency. by Laurent Jacob <laurent.jacob@gmail.com> 2011-03-29 23:02:01 +0000;
  • 0434f53 LJ: Switched the default demo to KEGG networks instead of NCI. by Laurent Jacob <laurent.jacob@gmail.com> 2011-03-23 22:49:04 +0000;
  • 0280b3e LJ: Updated version for bioC 2.8 release. Changes include: by Laurent Jacob <laurent.jacob@gmail.com> 2011-03-23 22:42:35 +0000;
  • ac3e5e6 Bumped version numbers again for new BioC 2.8 devel cycle. ERRATA: Previous bump was for BioC 2.7 release (of course), not 2.6! by Herve Pages <hpages@fhcrc.org> 2010-10-18 05:57:44 +0000;
  • 5b8cf03 (origin/RELEASE_2_7, RELEASE_2_7) Creating branch for BioC 2.7 release by Herve Pages <hpages@fhcrc.org> 2010-10-18 05:49:17 +0000;
  • 6e15cf2 Bumped version numbers for BioC 2.6 release by Herve Pages <hpages@fhcrc.org> 2010-10-18 05:34:23 +0000;
  • a8c0032 LJ by Laurent Jacob <laurent.jacob@gmail.com> 2010-10-15 21:49:12 +0000;
  • 9d7b040 LJ by Laurent Jacob <laurent.jacob@gmail.com> 2010-10-15 21:48:53 +0000;
  • 6fa7f7a Added package DEGraph to svn . by Nishant Gopalakrishnan <ngopalak@fhcrc.org> 2010-10-15 18:54:36 +0000;