export("AN.test", "BS.test", "getConnectedComponentList", "getKEGGPathways", "getSignedGraph", "graph.T2.test", "hyper.test", "laplacianFromA", "plotValuedGraph", "randomWAMGraph", "testOneConnectedComponent", "testOneGraph", "twoSampleFromGraph", "writeAdjacencyMatrix2KGML") ## import(R.utils) import(graph) import(KEGGgraph) ## importFrom(graph,subGraph, numEdges, validGraph, isDirected, removeEdge) ## importFrom(KEGGGraph, parseKGML, getPathwayInfo, KEGGpathway2Graph, getTitle, getSubtype) importFrom(NCIgraph, is.NCIgraph) ##importFrom(KEGGGraph, getKEGGedgeData) ##importFrom(graph, edgeData) importFrom(R.methodsS3, throw) importFrom(Rgraphviz, layoutGraph, renderGraph) importFrom(rrcov, T2.test) importFrom(mvtnorm, rmvnorm) importFrom(RBGL,connectedComp) importFrom(lattice, level.colors) ## importFrom(NCIgraph, is.NCIgraph)