Package: CytoML
Type: Package
Title: GatingML interface for openCyto
Version: 1.2.1
Date: 2016-04-15
Author: Mike Jiang
Maintainer: Mike Jiang <wjiang2@fhcrc.org>
Description: This package is designed to use GatingML2.0 as the standard format
    to exchange the gated data with other software platform.
License: Artistic-2.0
LazyData: TRUE
Imports:
    flowCore,
    flowWorkspace (>= 3.21.10),
    openCyto (>= 1.11.3),
    XML,
    data.table,
    flowUtils (>= 1.35.7),
    jsonlite,
    RBGL,
    ncdfFlow,
    Rgraphviz,
    Biobase,
    methods,
    graph,
    graphics,
    utils,
    base64enc,
    plyr
biocViews: FlowCytometry, DataImport, DataRepresentation
Suggests:
    testthat,
    flowWorkspaceData (>= 2.11.1),
    knitr,
    ggcyto
LinkingTo: Rcpp, flowWorkspace, BH(>= 1.62.0-1)
VignetteBuilder: knitr
SystemRequirements: xml2, GNU make, C++11
RoxygenNote: 5.0.1
Collate:
    'GatingSet2cytobank.R'
    'GatingSet2flowJo.R'
    'RcppExports.R'
    'cytobank2GatingSet.R'
    'diva2GatingSet.R'
    'flowUtils_functions.R'
    'read.gatingML.cytobank.R'
    'graphGML_methods.R'
    'set.count.xml.R'
    'utils.R'