# Generated by roxygen2: do not edit by hand S3method(cytobank_to_gatingset,cytobank_experiment) S3method(cytobank_to_gatingset,default) S3method(extend,ellipsoidGate) S3method(extend,polygonGate) S3method(extend,rectangleGate) S3method(print,cytobank_experiment) export(GatingSet2cytobank) export(GatingSet2flowJo) export(ce_get_channels) export(ce_get_compensations) export(ce_get_markers) export(ce_get_panels) export(ce_get_samples) export(ce_get_transformations) export(cytobank2GatingSet) export(cytobankExperiment) export(cytobank_to_gatingset) export(diva_get_sample_groups) export(diva_get_samples) export(diva_to_gatingset) export(extend) export(fj_ws_get_keywords) export(fj_ws_get_sample_groups) export(fj_ws_get_samples) export(flowjo_to_gatingset) export(gatingset_to_cytobank) export(gatingset_to_flowjo) export(getKeywords) export(getSampleGroups) export(getSamples) export(gs_compare_cytobank_counts) export(openDiva) export(open_cytobank_experiment) export(open_diva_xml) export(open_flowjo_xml) export(parseWorkspace) exportClasses(diva_workspace) exportClasses(flowjo_workspace) exportMethods(colnames) exportMethods(markernames) exportMethods(pData) exportMethods(parseWorkspace) exportMethods(sampleNames) exportMethods(show) import(data.table) importClassesFrom(Biobase,AssayData) importClassesFrom(graph,graph) importClassesFrom(graph,graphBase) importClassesFrom(graph,graphNEL) importClassesFrom(methods,ANY) importClassesFrom(methods,character) importClassesFrom(methods,data.frame) importClassesFrom(methods,environment) importClassesFrom(methods,list) importClassesFrom(methods,logical) importClassesFrom(methods,matrix) importClassesFrom(methods,missing) importClassesFrom(methods,numeric) importClassesFrom(methods,oldClass) importFrom(RBGL,tsort) importFrom(Rgraphviz,layoutGraph) importFrom(Rgraphviz,renderGraph) importFrom(XML,"xmlAttrs<-") importFrom(XML,addChildren) importFrom(XML,getNodeSet) importFrom(XML,names.XMLNode) importFrom(XML,newXMLNode) importFrom(XML,saveXML) importFrom(XML,xmlAttrs) importFrom(XML,xmlChildren) importFrom(XML,xmlElementsByTagName) importFrom(XML,xmlGetAttr) importFrom(XML,xmlName) importFrom(XML,xmlNamespace) importFrom(XML,xmlNode) importFrom(XML,xmlRoot) importFrom(XML,xmlSApply) importFrom(XML,xmlTree) importFrom(XML,xmlTreeParse) importFrom(XML,xmlValue) importFrom(XML,xpathApply) importFrom(XML,xpathSApply) importFrom(cytolib,cytolib_LdFlags) importFrom(dplyr,"%>%") importFrom(dplyr,arrange) importFrom(dplyr,bind_rows) importFrom(dplyr,count) importFrom(dplyr,enquo) importFrom(dplyr,filter) importFrom(dplyr,group_by) importFrom(dplyr,rename) importFrom(dplyr,select) importFrom(flowCore,"colnames<-") importFrom(flowCore,"identifier<-") importFrom(flowCore,"parameters<-") importFrom(flowCore,asinhtGml2) importFrom(flowCore,colnames) importFrom(flowCore,compensate) importFrom(flowCore,compensatedParameter) importFrom(flowCore,compensation) importFrom(flowCore,ellipsoidGate) importFrom(flowCore,eval) importFrom(flowCore,identifier) importFrom(flowCore,keyword) importFrom(flowCore,logicleTransform) importFrom(flowCore,logicletGml2) importFrom(flowCore,logtGml2) importFrom(flowCore,parameters) importFrom(flowCore,polygonGate) importFrom(flowCore,read.FCS) importFrom(flowCore,rectangleGate) importFrom(flowCore,spillover) importFrom(flowCore,transformList) importFrom(flowCore,transformReference) importFrom(flowCore,unitytransform) importFrom(flowWorkspace,"markernames<-") importFrom(flowWorkspace,"pData<-") importFrom(flowWorkspace,GatingSet) importFrom(flowWorkspace,asinh_Gml2) importFrom(flowWorkspace,asinhtGml2_trans) importFrom(flowWorkspace,cf_write_disk) importFrom(flowWorkspace,cs_load_meta) importFrom(flowWorkspace,cs_lock) importFrom(flowWorkspace,cs_set_cytoframe) importFrom(flowWorkspace,cs_swap_colnames) importFrom(flowWorkspace,cs_unlock) importFrom(flowWorkspace,cytoset) importFrom(flowWorkspace,flow_trans) importFrom(flowWorkspace,getChildren) importFrom(flowWorkspace,getCompensationMatrices) importFrom(flowWorkspace,getGate) importFrom(flowWorkspace,getNodes) importFrom(flowWorkspace,getParent) importFrom(flowWorkspace,getTransformations) importFrom(flowWorkspace,get_cytoframe_from_cs) importFrom(flowWorkspace,get_default_backend) importFrom(flowWorkspace,gh_pop_compare_stats) importFrom(flowWorkspace,gh_pop_get_data) importFrom(flowWorkspace,gh_pop_is_hidden) importFrom(flowWorkspace,gh_pop_is_negated) importFrom(flowWorkspace,gh_pop_set_xml_count) importFrom(flowWorkspace,gs_clone) importFrom(flowWorkspace,gs_copy_tree_only) importFrom(flowWorkspace,gs_get_compensation_internal) importFrom(flowWorkspace,gs_pop_add) importFrom(flowWorkspace,gs_pop_get_children) importFrom(flowWorkspace,gs_pop_get_count_fast) importFrom(flowWorkspace,gs_pop_get_data) importFrom(flowWorkspace,gs_pop_get_parent) importFrom(flowWorkspace,gs_pop_set_name) importFrom(flowWorkspace,gs_split_by_tree) importFrom(flowWorkspace,gs_update_channels) importFrom(flowWorkspace,load_cytoframe) importFrom(flowWorkspace,load_cytoset_from_fcs) importFrom(flowWorkspace,load_gs) importFrom(flowWorkspace,logicleGml2_trans) importFrom(flowWorkspace,logicle_trans) importFrom(flowWorkspace,logtGml2_trans) importFrom(flowWorkspace,markernames) importFrom(flowWorkspace,merge_list_to_gs) importFrom(flowWorkspace,openWorkspace) importFrom(flowWorkspace,pData) importFrom(flowWorkspace,pop_add) importFrom(flowWorkspace,recompute) importFrom(flowWorkspace,sampleNames) importFrom(flowWorkspace,save_gs) importFrom(flowWorkspace,show) importFrom(flowWorkspace,swap_data_cols) importFrom(flowWorkspace,transform) importFrom(flowWorkspace,transformerList) importFrom(ggcyto,rescale_gate) importFrom(grDevices,rgb) importFrom(graph,"nodeData<-") importFrom(graph,"nodeDataDefaults<-") importFrom(graph,"nodeRenderInfo<-") importFrom(graph,"nodes<-") importFrom(graph,addEdge) importFrom(graph,addNode) importFrom(graph,edges) importFrom(graph,graphNEL) importFrom(graph,inEdges) importFrom(graph,nodeData) importFrom(graph,removeNode) importFrom(graphics,abline) importFrom(graphics,polygon) importFrom(graphics,text) importFrom(jsonlite,base64_dec) importFrom(jsonlite,base64_enc) importFrom(jsonlite,fromJSON) importFrom(jsonlite,toJSON) importFrom(methods,as) importFrom(methods,extends) importFrom(methods,is) importFrom(methods,new) importFrom(methods,selectMethod) importFrom(methods,show) importFrom(methods,slot) importFrom(tibble,tibble) importFrom(utils,localeToCharset) importFrom(utils,menu) importFrom(utils,packageVersion) importFrom(yaml,read_yaml) useDynLib(CytoML,.registration = TRUE)