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add max_density argument

Zuguang Gu authored on 15/06/2022 10:42:56
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@@ -1,5 +1,6 @@
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 \name{set_component_height-Heatmap-method}
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 \alias{set_component_height,Heatmap-method}
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+\alias{set_component_height}
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 \title{
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 Set Height of Heatmap Component
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 }
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@@ -29,8 +30,8 @@ The \code{\link{Heatmap-class}} object.
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 \author{
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 Zuguang Gu <z.gu@dkfz.de>
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 }
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-\alias{set_component_height}
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 \examples{
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 # There is no example
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 NULL
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+
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 }
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rename to anno_textbox()

Zuguang Gu authored on 15/06/2022 10:11:58
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@@ -1,6 +1,5 @@
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 \name{set_component_height-Heatmap-method}
2 2
 \alias{set_component_height,Heatmap-method}
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-\alias{set_component_height}
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 \title{
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 Set Height of Heatmap Component
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 }
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@@ -30,8 +29,8 @@ The \code{\link{Heatmap-class}} object.
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 \author{
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 Zuguang Gu <z.gu@dkfz.de>
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 }
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+\alias{set_component_height}
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 \examples{
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 # There is no example
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 NULL
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-
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 }
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won't generate color matrix when type=='none'

Zuguang Gu authored on 15/12/2020 12:01:39
Showing1 changed files
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@@ -1,5 +1,6 @@
1 1
 \name{set_component_height-Heatmap-method}
2 2
 \alias{set_component_height,Heatmap-method}
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+\alias{set_component_height}
3 4
 \title{
4 5
 Set Height of Heatmap Component
5 6
 }
... ...
@@ -29,8 +30,8 @@ The \code{\link{Heatmap-class}} object.
29 30
 \author{
30 31
 Zuguang Gu <z.gu@dkfz.de>
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 }
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-\alias{set_component_height}
33 33
 \examples{
34 34
 # There is no example
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 NULL
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+
36 37
 }
Browse code

translate stats::heatmap() and gplots::heatmap.2()

Zuguang Gu authored on 13/12/2020 20:54:51
Showing1 changed files
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@@ -1,6 +1,5 @@
1 1
 \name{set_component_height-Heatmap-method}
2 2
 \alias{set_component_height,Heatmap-method}
3
-\alias{set_component_height}
4 3
 \title{
5 4
 Set Height of Heatmap Component
6 5
 }
... ...
@@ -30,8 +29,8 @@ The \code{\link{Heatmap-class}} object.
30 29
 \author{
31 30
 Zuguang Gu <z.gu@dkfz.de>
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 }
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+\alias{set_component_height}
33 33
 \examples{
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 # There is no example
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 NULL
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-
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 }
Browse code

update

Zuguang Gu authored on 20/10/2019 06:57:30
Showing1 changed files
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@@ -1,5 +1,6 @@
1 1
 \name{set_component_height-Heatmap-method}
2 2
 \alias{set_component_height,Heatmap-method}
3
+\alias{set_component_height}
3 4
 \title{
4 5
 Set Height of Heatmap Component
5 6
 }
... ...
@@ -29,8 +30,8 @@ The \code{\link{Heatmap-class}} object.
29 30
 \author{
30 31
 Zuguang Gu <z.gu@dkfz.de>
31 32
 }
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-\alias{set_component_height}
33 33
 \examples{
34 34
 # There is no example
35 35
 NULL
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+
36 37
 }
Browse code

generate documentations by pkgdown

Zuguang Gu authored on 18/10/2019 11:34:02
Showing1 changed files
1 1
new file mode 100644
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@@ -0,0 +1,36 @@
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+\name{set_component_height-Heatmap-method}
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+\alias{set_component_height,Heatmap-method}
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+\title{
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+Set Height of Heatmap Component
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+}
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+\description{
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+Set Height of Heatmap Component
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+}
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+\usage{
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+\S4method{set_component_height}{Heatmap}(object, k, v)
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+}
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+\arguments{
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+
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+  \item{object}{A \code{\link{Heatmap-class}} object.}
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+  \item{k}{Which column component? The value should a numeric index or the name of the corresponding column component. See **Detials**.}
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+  \item{v}{Height of the component, a \code{\link[grid]{unit}} object.}
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+
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+}
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+\details{
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+All column components are: \code{column_title_top}, \code{column_dend_top}, \code{column_names_top}, 
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+\code{column_anno_top}, \code{heatmap_body}, \code{column_anno_bottom}, \code{column_names_bottom}, 
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+\code{column_dend_bottom}, \code{column_title_bottom}.
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+
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+This function is only for internal use.
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+}
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+\value{
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+The \code{\link{Heatmap-class}} object.
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+}
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+\author{
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+Zuguang Gu <z.gu@dkfz.de>
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+}
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+\alias{set_component_height}
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+\examples{
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+# There is no example
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+NULL
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+}