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add max_density argument

Zuguang Gu authored on 15/06/2022 10:42:56
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@@ -22,4 +22,5 @@ See \code{\link{AnnotationFunction}} constructor for details.
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 \examples{
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 # There is no example
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 NULL
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+
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 }
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rename to anno_textbox()

Zuguang Gu authored on 15/06/2022 10:11:58
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@@ -22,5 +22,4 @@ See \code{\link{AnnotationFunction}} constructor for details.
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 \examples{
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 # There is no example
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 NULL
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-
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 }
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won't generate color matrix when type=='none'

Zuguang Gu authored on 15/12/2020 12:01:39
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@@ -22,4 +22,5 @@ See \code{\link{AnnotationFunction}} constructor for details.
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 \examples{
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 # There is no example
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 NULL
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+
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 }
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translate stats::heatmap() and gplots::heatmap.2()

Zuguang Gu authored on 13/12/2020 20:54:51
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@@ -22,5 +22,4 @@ See \code{\link{AnnotationFunction}} constructor for details.
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 \examples{
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 # There is no example
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 NULL
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-
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 }
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update

Zuguang Gu authored on 20/10/2019 06:57:30
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@@ -22,4 +22,5 @@ See \code{\link{AnnotationFunction}} constructor for details.
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 \examples{
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 # There is no example
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 NULL
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+
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 }
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generate documentations by pkgdown

Zuguang Gu authored on 18/10/2019 11:34:02
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new file mode 100644
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+\name{AnnotationFunction-class}
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+\docType{class}
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+\alias{AnnotationFunction-class}
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+\title{
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+The AnnotationFunction Class
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+}
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+\description{
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+The AnnotationFunction Class
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+}
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+\details{
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+The heatmap annotation is basically graphics aligned to the heatmap columns or rows.
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+There is no restriction for the graphic types, e.g. it can be heatmap-like
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+annotation or points. Here the AnnotationFunction class is designed for
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+creating complex and flexible annotation graphics. As the main part of the class, it uses
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+a user-defined function to define the graphics. It also keeps information of
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+the size of the plotting regions of the annotation. And most importantly, it
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+allows subsetting to the annotation to draw a subset of the graphics, which
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+is the base for the splitting of the annotations.
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+
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+See \code{\link{AnnotationFunction}} constructor for details.
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+}
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+\examples{
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+# There is no example
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+NULL
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+}