1. ComplexHeatmap
  2. vignettes
  3. s7.interactive.Rmd
Browse code

a backup push

Zuguang Gu authored on 18/09/2018 10:40:29
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vignettes/s7.interactive.Rmd
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-<!--
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-%\VignetteEngine{knitr}
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-%\VignetteIndexEntry{7. Interactive with Heatmaps}
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-
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-Interactive with Heatmaps
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-========================================
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-
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-**Author**: Zuguang Gu ( z.gu@dkfz.de )
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-
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-**Date**: `r Sys.Date()`
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-
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-
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-```{r global_settings, echo = FALSE, message = FALSE}
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-library(markdown)
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-
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-library(knitr)
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-knitr::opts_chunk$set(
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-    error = FALSE,
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-    tidy  = FALSE,
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-    message = FALSE,
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-    fig.align = "center",
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-    fig.width = 5,
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-    fig.height = 5)
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-options(markdown.HTML.stylesheet = "custom.css")
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-
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-options(width = 100)
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-```
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-
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-If the heatmap is plotted in the interactive graphic device, users can use mouse
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-to select a sub-area in the heatmap and retrieve index for rows and columns in that selected area.
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-Since heatmaps are always used to visualize patterns that are clustered together,
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-this feature can greatly give convinience to extract the sub-matrix that users are interested in.
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-
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-<p><img src="select_region.gif" width="600" /></p>
Browse code

revised documentations

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ComplexHeatmap@114991 bc3139a8-67e5-0310-9ffc-ced21a209358

z.gu authored on 19/03/2016 17:59:18
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vignettes/s7.interactive.Rmd
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@@ -33,4 +33,4 @@ to select a sub-area in the heatmap and retrieve index for rows and columns in t
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 Since heatmaps are always used to visualize patterns that are clustered together,
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 this feature can greatly give convinience to extract the sub-matrix that users are interested in.
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-<p><img src="select_region.gif" /></p>
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+<p><img src="select_region.gif" width="600" /></p>
Browse code

Merge branch 'master' into devel

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ComplexHeatmap@109609 bc3139a8-67e5-0310-9ffc-ced21a209358

z.gu authored on 14/10/2015 09:59:57
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vignettes/s7.interactive.Rmd
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 ```
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 If the heatmap is plotted in the interactive graphic device, users can use mouse
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-to select a sub-region in the heatmap and retrieve index for rows and columns in that selected region.
32 
+to select a sub-area in the heatmap and retrieve index for rows and columns in that selected area.
33 33 
 Since heatmaps are always used to visualize patterns that are clustered together,
34 34 
 this feature can greatly give convinience to extract the sub-matrix that users are interested in.
35 35
Browse code

Merge branch 'master' into devel

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ComplexHeatmap@108253 bc3139a8-67e5-0310-9ffc-ced21a209358

z.gu authored on 07/09/2015 20:39:32
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vignettes/s7.interactive.Rmd
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Browse code

resolve conflict from master branch

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ComplexHeatmap@108131 bc3139a8-67e5-0310-9ffc-ced21a209358

z.gu authored on 03/09/2015 20:32:44
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vignettes/s7.interactive.Rmd
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+<!--
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+%\VignetteEngine{knitr}
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+%\VignetteIndexEntry{7. Interactive with Heatmaps}
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+-->
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+
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+Interactive with Heatmaps
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+========================================
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+
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+**Author**: Zuguang Gu ( z.gu@dkfz.de )
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+
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+**Date**: `r Sys.Date()`
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+
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+-------------------------------------------------------------
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+
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+```{r global_settings, echo = FALSE, message = FALSE}
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+library(markdown)
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+
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+library(knitr)
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+knitr::opts_chunk$set(
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+    error = FALSE,
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+    tidy  = FALSE,
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+    message = FALSE,
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+    fig.align = "center",
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+    fig.width = 5,
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+    fig.height = 5)
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+options(markdown.HTML.stylesheet = "custom.css")
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+
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+options(width = 100)
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+```
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+
31 
+If the heatmap is plotted in the interactive graphic device, users can use mouse
32 
+to select a sub-region in the heatmap and retrieve index for rows and columns in that selected region.
33 
+Since heatmaps are always used to visualize patterns that are clustered together,
34 
+this feature can greatly give convinience to extract the sub-matrix that users are interested in.
35 
+
36 
+<p><img src="select_region.gif" /></p>