... | ... |
@@ -426,8 +426,10 @@ setMethod(f = "draw", |
426 | 426 |
# heatmap_legend_offset = annotation_legend_offset |
427 | 427 |
# } |
428 | 428 |
|
429 |
- object@heatmap_legend_param$offset = unit(0, "mm") #heatmap_legend_offset |
|
430 |
- object@annotation_legend_param$offset = unit(0, "mm") #annotation_legend_offset |
|
429 |
+ if(is.null(object@heatmap_legend_param$offset)) |
|
430 |
+ object@heatmap_legend_param$offset = unit(0, "mm") #heatmap_legend_offset |
|
431 |
+ if(is.null(object@annotation_legend_param$offset)) |
|
432 |
+ object@annotation_legend_param$offset = unit(0, "mm") #annotation_legend_offset |
|
431 | 433 |
|
432 | 434 |
object@ht_list_param$adjust_annotation_extension = adjust_annotation_extension |
433 | 435 |
|
... | ... |
@@ -101,16 +101,17 @@ setMethod(f = "draw_heatmap_legend", |
101 | 101 |
annotation_legend_size = object@annotation_legend_param$size |
102 | 102 |
offset = object@heatmap_legend_param$offset |
103 | 103 |
|
104 |
- # if(inherits(offset, "character")) { |
|
105 |
- # if(offset == "annotation_top") { |
|
106 |
- # i_ht = object@ht_list_param$main_heatmap |
|
107 |
- # main_ht = object@ht_list[[i_ht]] |
|
108 |
- # offset = unit(1, "npc") - main_ht@layout$layout_size$column_title_top_height - |
|
109 |
- # main_ht@layout$layout_size$column_dend_top_height - |
|
110 |
- # (unit(0.5, "npc") + size[2]*0.5) |
|
111 |
- # } |
|
112 |
- # } |
|
113 |
- offset = unit(0, "mm") |
|
104 |
+ if(inherits(offset, "character")) { |
|
105 |
+ if(offset == "annotation_top") { |
|
106 |
+ i_ht = object@ht_list_param$main_heatmap |
|
107 |
+ main_ht = object@ht_list[[i_ht]] |
|
108 |
+ offset = unit(1, "npc") - main_ht@layout$layout_size$column_title_top_height - |
|
109 |
+ main_ht@layout$layout_size$column_dend_top_height - |
|
110 |
+ (unit(0.5, "npc") + size[2]*0.5) |
|
111 |
+ } |
|
112 |
+ } else { |
|
113 |
+ offset = unit(0, "mm") |
|
114 |
+ } |
|
114 | 115 |
|
115 | 116 |
if(side != annotation_legend_side) { |
116 | 117 |
y = unit(0.5, "npc") |
... | ... |
@@ -293,7 +293,7 @@ draw(anno, test = "heatmap, colors") |
293 | 293 |
anno = anno_mark(at = c(1:4, 20, 60, 97:100), labels = month.name[1:10], which = "row") |
294 | 294 |
draw(anno, index = 1:100, test = "anno_mark") |
295 | 295 |
|
296 |
-anno = anno_mark(at = c(1:4, 20, 60, 97:100), labels = month.name[1:10], labels_rot = 30, which = "row") |
|
296 |
+anno = anno_mark(at = c(1:4, 20, 60, 97:100), labels = month.name[1:10], labels_rot = 30, which = "column") |
|
297 | 297 |
draw(anno, index = 1:100, test = "anno_mark") |
298 | 298 |
|
299 | 299 |
m = matrix(1:1000, byrow = TRUE, nr = 100) |