\name{grid.dendrogram} \alias{grid.dendrogram} \title{ Draw dendrogram under grid system } \description{ Draw dendrogram under grid system } \usage{ grid.dendrogram(dend, facing = c("bottom", "top", "left", "right"), max_height = NULL, order = c("normal", "reverse"), ...) } \arguments{ \item{dend}{a \code{\link[stats]{dendrogram}} object.} \item{facing}{facing of the dendrogram.} \item{max_height}{maximum height of the dendrogram. It is useful to make dendrograms comparable if you want to plot more than one dendrograms. Height for each dendrogram can be obtained by \code{attr(dend, "height")}.} \item{order}{should leaves of dendrogram be put in the normal order (1, ..., n) or reverse order (n, ..., 1)? It may matters for the dendrograms putting on left and right.} \item{...}{pass to \code{\link[grid]{viewport}} which contains the dendrogram.} } \details{ The dendrogram can be renderred (e.g. by \code{dendextend} package). A viewport is created which contains the dendrogram. This function only plots the dendrogram without adding labels. The leaves of the dendrogram locates at \code{unit(c(0.5, 1.5, ...(n-0.5))/n, "npc")}. } \value{ No value is returned. } \author{ Zuguang Gu <z.gu@dkfz.de> } \examples{ hc = hclust(dist(USArrests[1:5, ])) dend = as.dendrogram(hc) grid.newpage() layout = grid.layout(nrow = 2, ncol = 2) pushViewport(viewport(layout = layout)) grid.dendrogram(dend, layout.pos.row = 1, layout.pos.col = 1) grid.dendrogram(dend, facing = "top", layout.pos.row = 1, layout.pos.col = 2) grid.dendrogram(dend, facing = "top", order = "reverse", layout.pos.row = 2, layout.pos.col = 1) grid.dendrogram(dend, facing = "left", layout.pos.row = 2, layout.pos.col = 2) upViewport() }