\name{ComplexHeatmap-package}
 \docType{package}
 \alias{ComplexHeatmap-package}
 \title{

 Making complex heatmap

 }
 \description{

 Making complex heatmap

 }
 \details{

 This package aims to provide a simple and flexible way to arrange
 multiple heatmaps as well as self-defining annotation graphics.

 The package is implemented in an object-oriented way. 

 Components of heatmap lists are abstracted into several classes.

 \itemize{
   \item \code{\link{Heatmap-class}}: a single heatmap containing heatmap body, row/column names, titles, dendrograms and column annotations.
   \item \code{\link{HeatmapList-class}}: a list of heatmaps and row annotations.
   \item \code{\link{HeatmapAnnotation-class}}: a list of row annotations or column annotations.
 }
 

 There are also several internal classes:

 \itemize{
   \item \code{\link{SingleAnnotation-class}}: a single row annotation or column annotation.
   \item \code{\link{ColorMapping-class}}: mapping from values to colors.
 }
 

 For plotting one single heatmap, please go to the documentation page of \code{\link{Heatmap}}.
 For plotting multiple heatmaps, please go to \code{\link{HeatmapList-class}} and \code{+.AdditiveUnit}.

 The vignette provides detailed explanation of how to use this package.

 }

 \examples{
 # There is no example
 NULL
 
 }