vignettes/s7.interactive.Rmd
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 <!--
 %\VignetteEngine{knitr}
 %\VignetteIndexEntry{7. Interactive with Heatmaps}
 -->
 
 Interactive with Heatmaps
 ========================================
 
 **Author**: Zuguang Gu ( z.gu@dkfz.de )
 
 **Date**: `r Sys.Date()`
 
 -------------------------------------------------------------
 
 ```{r global_settings, echo = FALSE, message = FALSE}
 library(markdown)
 
 library(knitr)
 knitr::opts_chunk$set(
     error = FALSE,
     tidy  = FALSE,
     message = FALSE,
     fig.align = "center",
     fig.width = 5,
     fig.height = 5)
 options(markdown.HTML.stylesheet = "custom.css")
 
 options(width = 100)
 ```
 
 If the heatmap is plotted in the interactive graphic device, users can use mouse
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 to select a sub-area in the heatmap and retrieve index for rows and columns in that selected area.
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 Since heatmaps are always used to visualize patterns that are clustered together, 
 this feature can greatly give convinience to extract the sub-matrix that users are interested in.
 
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 <p><img src="select_region.gif" width="600" /></p>