^\.travis\.yml$
^appveyor\.yml$
^\.lintr$
^\.astylerc$
^.*\.Rproj$
^\.Rproj\.user$

^inst/benchmarks/
^inst/profiling/
^inst/vignettes/

^src/AtomicDomain.o
^src/Cogaps.o
^src/GapsRunner.o
^src/GapsStatistics.o
^src/GibbsSampler.o
^src/ProposalQueue.o
^src/RcppExports.o
^src/test-runner.o
^src/data_structures/Matrix.o
^src/data_structures/Vector.o
^src/file_parser/CsvParser.o
^src/file_parser/TsvParser.o
^src/file_parser/MtxParser.o
^src/math/Algorithms.o
^src/math/Random.o
^src/cpp_tests/testAlgorithms.o
^src/cpp_tests/testAtomicDomain.o
^src/cpp_tests/testEfficientSets.o
^src/cpp_tests/testFileParsers.o
^src/cpp_tests/testGapsRunner.o
^src/cpp_tests/testGibbsSampler.o
^src/cpp_tests/testMatrix.o
^src/cpp_tests/testProposalQueue.o
^src/cpp_tests/testRandom.o
^src/cpp_tests/testSerialization.o