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@@ -5,6 +5,15 @@
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#include <omp.h>
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#endif
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+// create "nSets" vectors where each vector contains a vector of indices in the
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+// range [1,n)
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+// see createGWCoGAPSSets.R - here we just sample indices, that function
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+// samples gene names as well
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+static std::vector< std::vector<unsigned> > sampleIndices(unsigned n, unsigned nSets)
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+{
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+ // TODO implement
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+}
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+
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GapsRunner::GapsRunner(const Rcpp::NumericMatrix &D, const Rcpp::NumericMatrix &S,
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unsigned nFactor, unsigned nEquil, unsigned nCool, unsigned nSample,
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unsigned nOutputs, unsigned nSnapshots, float alphaA, float alphaP,
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