Package: CoGAPS
Version: 1.4.0
Date: 2011-09-02
Title: Coordinated Gene Activity in Pattern Sets 
Author: Elana J. Fertig
Description: Coordinated Gene Activity in Pattern Sets (CoGAPS) infers
  biological processes which are active in individual gene sets from
  corresponding microarray measurements.  CoGAPS achieves this inference by
  combining a MCMC matrix decomposition algorithm (GAPS) with a novel statistic
  inferring activity on gene sets. 
Maintainer: Elana J. Fertig <ejfertig@jhmi.edu>, Michael F. Ochs <mfo@jhu.edu>
SystemRequirements: GAPS-JAGS (==1.0.2)
Depends: R (>= 2.9.0), R.utils (>= 1.2.4)
Imports: graphics, grDevices, methods, stats, utils
License: GPL (== 2)
URL: http://www.cancerbiostats.onc.jhmi.edu/CoGAPS.cfm
biocViews: GeneExpression, Microarray, Bioinformatics