CoGAPS		Algorithm for coordination of activity in gene sets with patterns from GAPS
GAPS		MCMC matrix decomposition algorithm
calcCoGASPStat	Computes the CoGAPS gene set statistic 
plotSmoothPatterns	Plot loess smoothed CoGAPS patterns
ReadCoGAPSResults	Parse results saved to output folder after CoGAPS simulations
computeGeneGSProb	CoGAPS gene membership statistic
reorderByPatternMatch	Match two sets of patterns found with CoGAPS