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- getFeatures functions added to simple params settings to extract selected features from within trained model where relevant. - Nearest Shrunken Centroid added as a simple params function and a classifier keyword option.Dario Strbenac authored on 25/08/2022 05:15:03 |
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Merge branch 'master' of https://github.com/SydneyBioX/ClassifyRDario Strbenac authored on 24/08/2022 11:07:28 |
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- All mcols prefixed with S4Vectors for Windows.Dario Strbenac authored on 24/08/2022 11:06:23 |
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Update rankingDifferentMeans.REllis Patrick authored on 23/08/2022 21:22:56 • GitHub committed on 23/08/2022 21:22:56 |
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- Fixed remainder of old-format parameter construction in examples and a couple of typos.Dario Strbenac authored on 22/08/2022 05:30:05 |
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- Restored runTest, runTests, ModellingParams, CrossValParams as public documented functions. Vignette also restored to explain them. - Constructors for params now expect a character keyword which is then converted into a function internally.Dario Strbenac authored on 21/08/2022 16:07:38 |
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Update DESCRIPTIONEllis Patrick authored on 18/08/2022 05:10:00 • GitHub committed on 18/08/2022 05:10:00 |
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Update crossValidate.REllis Patrick authored on 18/08/2022 05:07:13 • GitHub committed on 18/08/2022 05:07:13 |
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Update DESCRIPTIONEllis Patrick authored on 18/08/2022 04:40:55 • GitHub committed on 18/08/2022 04:40:55 |
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Update rankingDifferentMeans.REllis Patrick authored on 18/08/2022 04:35:55 • GitHub committed on 18/08/2022 04:35:55 |
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- All references to runTest and runTests in examples and vignette converted to crossValidate. End users should always use crossValidate from now on. - Minor fixes to code mistakes. - Performance tuning of training method parameters chosen within feature selection is now faithfully used in the model training.Dario Strbenac authored on 17/08/2022 13:55:15 |
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- Classifiers and feature selection functions no longer have multiple signaures and are private. - prepareData function to filter and subset input data using common ways, such as missingness and variability. - The variable renaming and storage in Original Feature and Renamed Feature reverted back to column metadata and assay / feature colums. - sampleInfo now reverted back to clinical.Dario Strbenac authored on 14/08/2022 23:45:28 |
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Merge branch 'master' of https://github.com/SydneyBioX/ClassifyRDario Strbenac authored on 10/08/2022 03:55:21 |
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randomForest needed a data.frameEllis Patrick authored on 09/08/2022 12:16:05 |
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Fixed rankingEllis Patrick authored on 09/08/2022 11:39:47 |