# CiteFuse CiteFuse is a streamlined package consisting of a suite of tools for pre-processing, modality integration, clustering, differential RNA and ADT expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive web-based visualization of CITE-seq data ## Installation Install CiteFuse required Bioconductor 3.10 ```r library(BiocManager) install(version = "3.10") ``` ```r BiocManager::install(c("SummarizedExperiment", "S4Vectors", "SingleCellExperiment", "scater", "scran")) ``` ```r library(devtools) devtools::install_github("SydneyBioX/CiteFuse") ``` ## Vignette You can find the vignette at our website: https://sydneybiox.github.io/CiteFuse/articles/CiteFuse.html. ## CiteFuse overview <img src="https://raw.githubusercontent.com/SydneyBioX/CiteFuse/master/inst/figures/CiteFuse_overview.png" align="center"/>