# Generated by roxygen2: do not edit by hand S3method(any_task_errors,benchmark_tbl) S3method(apply_methods,benchmark_tbl) S3method(apply_methods,list) S3method(apply_methods,tbl_df) S3method(print,fn_arg_seq) S3method(print,task_error) S3method(strip_timing,benchmark_timing_tbl) S3method(summary,benchmark_tbl) S3method(time_methods,benchmark_timing_tbl) S3method(time_methods,list) S3method(unpack_timing,benchmark_timing_tbl) S3method(vctrs::vec_ptype_abbr,SingleCellExperiment) S3method(vctrs::vec_ptype_abbr,remote_error) S3method(vctrs::vec_ptype_abbr,task_error) export(all_unique) export(any_task_errors) export(apply_methods) export(apply_metrics) export(arrow_sep) export(as_pipeline_list) export(begin_benchmark) export(cache_method) export(cellbench_case_study) export(cellbench_file) export(clear_cached_datasets) export(clear_cellbench_cache) export(collapse_pipeline) export(data_list) export(filter_zero_genes) export(fn_arg_seq) export(fn_list) export(is.task_error) export(is_all_of) export(is_one_of) export(keep_high_count_cells) export(keep_high_count_genes) export(keep_high_var_genes) export(load_all_data) export(load_cell_mix_data) export(load_mrna_mix_data) export(load_sc_data) export(mhead) export(pipeline_collapse) export(sample_cells) export(sample_genes) export(set_cellbench_bpparam) export(set_cellbench_cache_path) export(set_cellbench_threads) export(split_step) export(strip_timing) export(time_methods) export(unpack_timing) importClassesFrom(SingleCellExperiment,SingleCellExperiment) importFrom(BiocFileCache,BiocFileCache) importFrom(BiocFileCache,bfcadd) importFrom(BiocFileCache,bfcquery) importFrom(BiocFileCache,bfcrpath) importFrom(BiocGenerics,updateObject) importFrom(BiocParallel,MulticoreParam) importFrom(BiocParallel,SerialParam) importFrom(BiocParallel,SnowParam) importFrom(BiocParallel,bplapply) importFrom(BiocParallel,bpnworkers) importFrom(BiocParallel,bptry) importFrom(assertthat,assert_that) importFrom(dplyr,mutate) importFrom(dplyr,select) importFrom(glue,glue) importFrom(lubridate,as.duration) importFrom(lubridate,seconds) importFrom(magrittr,"%>%") importFrom(magrittr,extract) importFrom(magrittr,set_names) importFrom(methods,is) importFrom(purrr,map) importFrom(purrr,map_dbl) importFrom(rappdirs,user_cache_dir) importFrom(rlang,":=") importFrom(rlang,.data) importFrom(rlang,exprs) importFrom(stats,setNames) importFrom(stats,var) importFrom(tibble,tibble) importFrom(tidyselect,all_of) importFrom(utils,browseURL)