Package: Category Title: Category Analysis Version: 2.64.0 Authors@R: c( person("Robert", "Gentleman", role="aut"), person("Seth", "Falcon", role="ctb"), person("Deepayan", "Sarkar", role="ctb"), person("Robert", "Castelo", role="ctb"), person("Bioconductor Package Maintainer", email = "maintainer@bioconductor.org", role="cre")) Description: A collection of tools for performing category (gene set enrichment) analysis. License: Artistic-2.0 Depends: methods, stats4, BiocGenerics, AnnotationDbi, Biobase, Matrix Imports: utils, stats, graph, RBGL, GSEABase, genefilter, annotate, DBI Suggests: EBarrays, ALL, Rgraphviz, RColorBrewer, xtable (>= 1.4-6), hgu95av2.db, KEGGREST, karyoploteR, geneplotter, limma, lattice, RUnit, org.Sc.sgd.db, GOstats, GO.db LazyLoad: Yes Collate: AllClasses.R AllGenerics.R categoryToEntrezBuilder-methods.R categoryName-methods.R hyperg-methods.R hyperGTest-methods.R linearMTest-methods.R DatPkg-accessors.R ChrBandTree.R tree_visitor.R cb_test.R initialize-methods.R HyperGParams-accessors.R LinearMParams-accessors.R HyperGResult-accessors.R LinearMResult-accessors.R ChrMapHyperGResult-accessors.R ChrMapLinearMResult-accessors.R show-methods.R universeBuilder-methods.R utils.R MAPcode.R catcode.R cateGOryMatrix.R gseaperm.R summary-methods.R mouse.R biocViews: Annotation, GO, Pathways, GeneSetEnrichment