Graph ofCNEr
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  • a9829eb (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:17:50 +0000;
  • 1c92f3d (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:17:50 +0000;
  • 0643f08 Pass serialized S4 instances thru updateObject() by Hervé Pagès <hpages.on.github@gmail.com> 2021-11-20 03:55:18 -0500;
  • 1fd0edc bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:11:47 +0000;
  • e682f2a (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:11:47 +0000;
  • 8ba95df bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:02:51 +0000;
  • fdeac98 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:02:51 +0000;
  • 9134e1d bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:54:44 -0400;
  • e5e582d (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:54:44 -0400;
  • e791de0 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:38:24 +0000;
  • 4d2a728 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:38:24 +0000;
  • eddb3c5 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:37:17 -0400;
  • fcde299 (origin/RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:52 -0400;
  • 997e4a6 fix CITATION by Ge Tan <gtan@me.com> 2019-09-13 11:49:55 +0200;
  • 8c2a355 version 1.21.1 by Ge Tan <gtan@me.com> 2019-09-12 21:04:52 +0200;
  • 0d00cf8 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:30 -0400;
  • 9c25d8e (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:47 -0400;
  • 0753f3a version 1.19.1 by Ge Tan <gtan@me.com> 2018-11-01 19:42:17 +0100;
  • 66aa88a (origin/RELEASE_3_8, RELEASE_3_8) version 1.18.1 by Ge Tan <gtan@me.com> 2018-11-01 19:42:17 +0100;
  • 9e00f29 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:32 -0400;
  • c26a277 bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:53 -0400;
  • 361c13c replace BiocInstaller biocLite mentions with BiocManager by LiNk-NY <mramos09@gmail.com> 2018-08-30 13:46:19 -0400;
  • dbd7f20 version 1.17.3 by Ge Tan <gtan@me.com> 2018-06-29 16:15:30 +0200;
  • a2bec4b (origin/RELEASE_3_7, RELEASE_3_7) version 1.17.2 by Ge Tan <gtan@me.com> 2018-05-31 14:47:49 +0200;
  • d0f6573 version 1.17.2 by Ge Tan <gtan@me.com> 2018-05-31 14:47:49 +0200;
  • 1ccd6c9 fix coersion error from GRangePairs by Ge Tan <gtan@me.com> 2018-05-31 14:20:27 +0200;
  • df54cba version 1.17.1 by Ge Tan <gtan@me.com> 2018-05-14 15:36:50 +0200;
  • 0048251 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:39 -0400;
  • f838ece bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:32 -0400;
  • 3853b63 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:53:02 -0400;
  • b8634d6 (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:40:11 -0400;
  • edba222 Merge remote-tracking branch 'upstream/master' by Ge Tan <gtan@me.com> 2017-09-21 20:22:21 +0200;
  • 7a46d0d sync with Bioc version by Ge Tan <gtan@me.com> 2017-07-12 14:57:29 +0200;
  • 099a77a 1.13.2 by Ge Tan <ge.tan09@imperial.ac.uk> 2017-07-12 12:57:21 +0000;
  • 90d611f (origin/RELEASE_3_5, RELEASE_3_5) Version: 1.12.1 by Ge Tan <ge.tan09@imperial.ac.uk> 2017-07-09 18:57:38 +0000;
  • 39d8d96 version 1.13.1 by Ge Tan <ge.tan09@imperial.ac.uk> 2017-07-03 12:49:54 +0000;
  • 1b64794 version 1.13.1 by Ge Tan <gtan@me.com> 2017-07-03 14:48:07 +0200;
  • 36eb679 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • f3127f6 Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 469cbfc bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • a3a9c44 donot export addAncestorGO now by Ge Tan <gtan@me.com> 2017-04-22 14:40:25 +0200;
  • 23cbcbc Only add the ancestor GO terms that exist in current annotation, not all the ancestor GO terms. by Ge Tan <gtan@me.com> 2017-04-22 11:43:23 +0200;
  • b6a4eaa version 1.11.8 by Ge Tan <ge.tan09@imperial.ac.uk> 2017-04-12 21:34:52 +0000;
  • 39adcb2 expect_equal by Ge Tan <gtan@me.com> 2017-04-12 23:20:50 +0200;
  • ff9fd4f version 1.11.8 by Ge Tan <gtan@me.com> 2017-04-12 22:21:45 +0200;
  • bcef1a4 (origin/RELEASE_3_4, RELEASE_3_4) Bump versions of all packages that define "c" methods by Herve Pages <hpages@fhcrc.org> 2017-03-16 02:03:50 +0000;
  • 4625459 small fix by Ge Tan <gtan@me.com> 2017-03-04 14:36:33 +0100;
  • cd2a5ac Use personal email by Ge Tan <gtan@me.com> 2017-02-28 17:03:14 +0000;
  • 8f69cf1 version 1.11.7 by Ge Tan <ge.tan09@imperial.ac.uk> 2017-02-23 12:09:09 +0000;
  • 61ec06c version 1.11.7 by Ge Tan <gtan@me.com> 2017-02-23 12:07:45 +0000;
  • 451b987 follow renaming of union class characterORNULL -> character_OR_NULL in S4Vectors by Herve Pages <hpages@fhcrc.org> 2017-02-01 12:25:20 +0000;
  • e4ad160 version bump to trigger propagation and reinstallation on user machines by Herve Pages <hpages@fhcrc.org> 2017-01-23 05:58:51 +0000;
  • 5550270 version 1.11.5 by Ge Tan <gtan@me.com> 2016-12-01 21:31:42 +0000;
  • e7c968d don't delete the scoring matrix when echoCommand by Ge Tan <gtan@me.com> 2016-11-24 19:59:53 +0100;
  • 763612d small fix by Ge Tan <gtan@me.com> 2016-11-24 15:10:30 +0100;
  • 8bfc7fc add the support of self-alignment by Ge Tan <gtan@me.com> 2016-11-24 15:08:10 +0100;
  • 55ea61b small fix for the command by Ge Tan <gtan@me.com> 2016-11-24 14:29:14 +0100;
  • 6152d78 version 1.11.4 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-11-03 19:39:53 +0000;
  • c601a99 version 1.11.4 by Ge Tan <gtan@me.com> 2016-11-03 19:38:11 +0000;
  • 27f69f9 Merge branch 'master' of github.com:ge11232002/CNEr by Ge Tan <gtan@me.com> 2016-11-03 19:09:05 +0000;
  • 016f3ef small bug fix for check axt file extensions by Ge Tan <gtan@me.com> 2016-11-03 19:08:57 +0000;
  • 1249e1d Update orgKEGGIds2EntrezIDs.Rd by Dimitris Polychronopoulos <dpolychr@gmail.com> 2016-10-25 21:51:32 +0100;
  • 5c930eb clean by Ge Tan <gtan@me.com> 2016-10-25 16:40:59 +0100;
  • fccd687 version 1.10.1 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-10-25 15:39:13 +0000;
  • 470c093 version 1.11.3 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-10-25 15:34:14 +0000;
  • 673696d small fix by Ge Tan <gtan@me.com> 2016-10-25 16:31:58 +0100;
  • 1b308f5 fix the order of meta columns in readAncora by Ge Tan <gtan@me.com> 2016-10-25 16:17:57 +0100;
  • c092f67 version 1.11.3 by Ge Tan <gtan@me.com> 2016-10-25 16:12:06 +0100;
  • cb0db07 suppress the warning when calculating the density by Ge Tan <gtan@me.com> 2016-10-19 18:07:37 +0100;
  • d41e39f update man page of makeGRBs by Ge Tan <gtan@me.com> 2016-10-19 17:48:42 +0100;
  • eef8d3d version 1.11.2 by Ge Tan <gtan@me.com> 2016-10-19 17:46:29 +0100;
  • 48031c7 modified man pages by dpolychr <dpolychr@gmail.com> 2016-10-18 14:59:34 +0100;
  • a590b07 version 1.9.44 by Ge Tan <gtan@me.com> 2016-10-18 12:10:02 +0100;
  • 73a201e bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • 08d5716 Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • e231921 bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • 0c8a5ec replace with lengths for better performance by Ge Tan <gtan@me.com> 2016-10-12 13:08:30 +0100;
  • 3e66695 format code by Ge Tan <gtan@me.com> 2016-10-06 14:59:20 +0100;
  • 4fda1a0 version 1.9.43 by Ge Tan <gtan@me.com> 2016-10-06 14:49:25 +0100;
  • 7fc88a9 version 1.9.43 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-10-06 11:30:52 +0000;
  • 71c0b8a version 1.9.42 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-10-04 17:00:55 +0000;
  • 24407e0 version 1.9.42 by Ge Tan <gtan@me.com> 2016-10-04 17:58:59 +0100;
  • a10aadf version 1.9.41 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-10-04 16:40:25 +0000;
  • 698c2d4 version 1.9.41 by Ge Tan <gtan@me.com> 2016-10-04 17:37:56 +0100;
  • 520aad0 small fix by Ge Tan <gtan@me.com> 2016-09-21 17:35:40 +0100;
  • e162951 version 1.9.40 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-09-21 16:29:07 +0000;
  • b63296b small fix by Ge Tan <gtan@me.com> 2016-09-21 17:25:51 +0100;
  • 0adb36f try to create the output dir anyway in makeCNEDensity by Ge Tan <gtan@me.com> 2016-09-20 16:37:28 +0100;
  • c0bd3a1 more efficient in lengths by Ge Tan <gtan@me.com> 2016-09-20 12:19:20 +0100;
  • 0288d5e version 1.9.40 by Ge Tan <gtan@me.com> 2016-09-20 11:30:22 +0100;
  • aa8cff9 version 1.9.39 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-09-12 14:04:22 +0000;
  • ecde8c5 version 1.9.39 by Ge Tan <gtan@me.com> 2016-09-12 14:59:49 +0100;
  • b438c26 Update Readme by Ge Tan <gtan@me.com> 2016-08-31 12:52:25 +0100;
  • 9295830 use read.delim instead of read_tsv by Ge Tan <gtan@me.com> 2016-08-31 12:46:49 +0100;
  • 8bdf8c5 version 1.9.38 by Ge Tan <ge.tan09@imperial.ac.uk> 2016-08-25 10:00:19 +0000;
  • adac92f version 1.9.38 by Ge Tan <gtan@me.com> 2016-08-25 10:57:31 +0100;
  • b3a8f2f version 1.9.37 by Ge Tan <gtan@me.com> 2016-08-22 17:51:33 +0100;
  • 97a64ac version 1.9.36 by Ge Tan <gtan@me.com> 2016-08-22 15:50:02 +0100;
  • 5f9494b fix the bug of cneMergeGRangePairs when no merging happens by Ge Tan <gtan@me.com> 2016-08-22 15:37:31 +0100;
  • 3bc0db8 modified vignette by dpolychr <dpolychr@gmail.com> 2016-08-21 15:48:32 +0100;