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_cheapcgi.c 100644 2 kb
_portimpl.c 100644 2 kb
_portimpl.h 100644 0 kb
axt.c 100644 27 kb
axt.h 100644 10 kb
base64.c 100644 3 kb
base64.h 100644 1 kb
binRange.c 100644 11 kb
binRange.h 100644 4 kb
bits.c 100644 7 kb
bits.h 100644 3 kb
chain.c 100644 17 kb
chain.h 100644 6 kb
cheapcgi.c 100644 56 kb
cheapcgi.h 100644 19 kb
cirTree.c 100644 17 kb
cirTree.h 100644 4 kb
common.c 100644 78 kb
common.h 100644 48 kb
dlist.c 100644 7 kb
dlist.h 100644 4 kb
dnaseq.c 100644 4 kb
dnaseq.h 100644 2 kb
dnautil.c 100644 24 kb
dnautil.h 100644 8 kb
dystring.c 100644 6 kb
dystring.h 100644 3 kb
errabort.c 100644 9 kb
errabort.h 100644 2 kb
hash.c 100644 18 kb
hash.h 100644 11 kb
htmshell.h 100644 6 kb
https.c 100644 8 kb
https.h 100644 0 kb
intExp.c 100644 2 kb
internet.c 100644 3 kb
internet.h 100644 1 kb
kxTok.c 100644 5 kb
kxTok.h 100644 2 kb
linefile.c 100644 31 kb
linefile.h 100644 12 kb
localmem.c 100644 5 kb
localmem.h 100644 2 kb
memalloc.c 100644 13 kb
memalloc.h 100644 2 kb
mime.c 100644 17 kb
mime.h 100644 3 kb
net.c 100644 66 kb
net.h 100644 10 kb
obscure.c 100644 16 kb
obscure.h 100644 6 kb
options.c 100644 12 kb
options.h 100644 4 kb
os.c 100644 0 kb
osunix.c 100644 15 kb
oswin9x.c 100644 5 kb
pipeline.c 100644 19 kb
pipeline.h 100644 6 kb
portable.h 100644 5 kb
portimpl.c 100644 3 kb
portimpl.h 100644 1 kb
servBrcMcw.c 100644 1 kb
servCrunx.c 100644 1 kb
servcis.c 100644 1 kb
servcl.c 100644 1 kb
servmsII.c 100644 1 kb
servpws.c 100644 1 kb
sig.h 100644 3 kb
sqlList.c 100644 26 kb
sqlList.h 100644 6 kb
sqlNum.c 100644 7 kb
sqlNum.h 100644 3 kb
udc.c 100644 47 kb
udc.h 100644 7 kb
verbose.c 100644 3 kb
verbose.h 100644 2 kb
wildcmp.c 100644 2 kb
README.md
# CNEr Conserved Noncoding Elements (CNEs) Identification and Visualisation ## Installation of the stable version of `CNEr` from Bioconductor ```R if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("CNEr") ``` ## Installation of the development version of `CNEr` from github **Prerequsite**: * Mac: Install "Command Line Tools" via `gcc` on terminal * Linux: Install a compiler and various development libraries (details vary across different flavors of Linux). * Windows: Install [Rtools](https://cran.r-project.org/bin/windows/Rtools/). ```R devtools::install_github("ge11232002/CNEr") ``` ## Vignette Latest vignette is available at http://rpubs.com/yang2/CNEr3