Name Mode Size
..
ucsc 040000
CNEr.h 100644 2 kb
IRanges_stubs.c 100644 0 kb
Makevars 100644 0 kb
Makevars.common 100644 0 kb
Makevars.win 100644 0 kb
R_init_CNEr.c 100644 1 kb
S4Vectors_stubs.c 100644 0 kb
XVector_stubs.c 100644 0 kb
ceScan.c 100644 30 kb
io.c 100644 6 kb
utils.c 100644 4 kb
README.md
# CNEr Conserved Noncoding Elements (CNEs) Identification and Visualisation ## Installation of the stable version of `CNEr` from Bioconductor ```R if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("CNEr") ``` ## Installation of the development version of `CNEr` from github **Prerequsite**: * Mac: Install "Command Line Tools" via `gcc` on terminal * Linux: Install a compiler and various development libraries (details vary across different flavors of Linux). * Windows: Install [Rtools](https://cran.r-project.org/bin/windows/Rtools/). ```R devtools::install_github("ge11232002/CNEr") ``` ## Vignette Latest vignette is available at http://rpubs.com/yang2/CNEr3