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Update README.md

Dimitris Polychronopoulos authored on 16/11/2019 15:45:49 • GitHub committed on 16/11/2019 15:45:49
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@@ -22,3 +22,11 @@ devtools::install_github("ge11232002/CNEr")
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 ## Vignette
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 Latest vignette is available at http://rpubs.com/yang2/CNEr3
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+
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+<b>Citation</b>:
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+
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+```
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+G. Tan, D. Polychronopoulos, B.Lenhard: 
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+CNEr: A toolkit for exploring extreme noncoding conservation.
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+PLoS Comput Biol. 2019 Aug 26;15(8):e1006940. doi: 10.1371/journal.pcbi.1006940. eCollection 2019 Aug. 
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+```
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replace BiocInstaller biocLite mentions with BiocManager

LiNk-NY authored on 30/08/2018 17:46:19
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@@ -4,8 +4,9 @@ Conserved Noncoding Elements (CNEs) Identification and Visualisation
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 ## Installation of the stable version of `CNEr` from Bioconductor
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 ```R
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-source("https://bioconductor.org/biocLite.R")
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-biocLite("CNEr")
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+if (!requireNamespace("BiocManager", quietly=TRUE))
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+    install.packages("BiocManager")
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+BiocManager::install("CNEr")
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 ```
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 ## Installation of the development version of `CNEr` from github
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Update Readme

Ge Tan authored on 31/08/2016 11:52:25
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@@ -9,8 +9,11 @@ biocLite("CNEr")
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 ```
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 ## Installation of the development version of `CNEr` from github
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+**Prerequsite**:
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-* **Mac and Linux**:
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+  * Mac: Install "Command Line Tools" via `gcc` on terminal
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+  * Linux: Install a compiler and various development libraries (details vary across different flavors of Linux).
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+  * Windows: Install [Rtools](https://cran.r-project.org/bin/windows/Rtools/).
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 ```R
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 devtools::install_github("ge11232002/CNEr")
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Update README.md

Ge Tan authored on 27/07/2016 20:27:21 • GitHub committed on 27/07/2016 20:27:21
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@@ -15,3 +15,6 @@ biocLite("CNEr")
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 ```R
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 devtools::install_github("ge11232002/CNEr")
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 ```
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+
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+## Vignette
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+Latest vignette is available at http://rpubs.com/yang2/CNEr3
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Create README.md

Ge Tan authored on 15/12/2015 18:11:39
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+# CNEr
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+Conserved Noncoding Elements (CNEs) Identification and Visualisation
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+
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+## Installation of the stable version of `CNEr` from Bioconductor
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+
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+```R
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+source("https://bioconductor.org/biocLite.R")
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+biocLite("CNEr")
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+```
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+
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+## Installation of the development version of `CNEr` from github
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+
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+* **Mac and Linux**:
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+
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+```R
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+devtools::install_github("ge11232002/CNEr")
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+```