README.md
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 # CNEr
 Conserved Noncoding Elements (CNEs) Identification and Visualisation
 
 ## Installation of the stable version of `CNEr` from Bioconductor
 
 ```R
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 if (!requireNamespace("BiocManager", quietly=TRUE))
     install.packages("BiocManager")
 BiocManager::install("CNEr")
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 ```
 
 ## Installation of the development version of `CNEr` from github
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 **Prerequsite**:
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   * Mac: Install "Command Line Tools" via `gcc` on terminal
   * Linux: Install a compiler and various development libraries (details vary across different flavors of Linux).
   * Windows: Install [Rtools](https://cran.r-project.org/bin/windows/Rtools/).
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 ```R
 devtools::install_github("ge11232002/CNEr")
 ```
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 ## Vignette
 Latest vignette is available at http://rpubs.com/yang2/CNEr3