1. CGHcall
  2. Graph
Graph of CGHcall
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • * |
  • | *
  • |/
  • *
  • *
  • *
  • | *
  • | *
  • | *
  • * |
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • *
  • *
  • *
  • *
  • | *
  • * |
  • | *
  • |/
  • *
  • *
  • *
  • | *
  • |/
  • *
  • *
  • *
  • *
  • *
  • *
  • | *
  • |/
  • *
  • *
  • | *
  • |/
  • 2435c10 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:38:53 -0400;
  • b735fbd (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:38:53 -0400;
  • f32b680 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 09:45:50 -0400;
  • 7cf3bba (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 09:45:49 -0400;
  • 775bb69 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:03:34 -0400;
  • 3c4d2aa (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:03:34 -0400;
  • b67bb07 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:00:15 +0000;
  • 483edc7 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:00:15 +0000;
  • 1c00124 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:51:30 +0000;
  • 9d6ed61 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:51:30 +0000;
  • 9962ce2 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:39:33 +0000;
  • b30726c (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:39:33 +0000;
  • 494ba7b bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:31:48 -0400;
  • f0b28b6 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:31:48 -0400;
  • 66e382c bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:15:39 +0000;
  • 0055950 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:15:39 +0000;
  • d2a8c38 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:34:46 -0400;
  • fbfc366 (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:07:52 -0400;
  • dd8e5a6 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:10:45 -0400;
  • 41d86f0 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:08 -0400;
  • 6d1aadb bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:27 -0400;
  • 1730063 (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:44 -0400;
  • 3985b6d bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:37 -0400;
  • 45989a6 (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:07 -0400;
  • 0618207 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:07 -0400;
  • 1108a35 (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:39:21 -0400;
  • a6d1d45 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • 9af5846 (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 5830797 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • 2037ba7 Processed vignettes (PDF or HTML) don't belong to the package source tree and are actually harmful. by Herve Pages <hpages@fhcrc.org> 2016-10-28 17:56:24 +0000;
  • e92c0ba (origin/RELEASE_3_4, RELEASE_3_4) Processed vignettes (PDF or HTML) don't belong to the package source tree and are actually harmful. by Herve Pages <hpages@fhcrc.org> 2016-10-28 17:53:44 +0000;
  • daf49e2 bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • 8f850b3 Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • 453307a bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • 6591012 Bumped up the version number by Sjoerd Vosse <s.vosse@vumc.nl> 2016-10-14 09:36:47 +0000;
  • 58b1dd1 Repaired a bug by Sjoerd Vosse <s.vosse@vumc.nl> 2016-09-29 08:33:51 +0000;
  • 419b43d (origin/RELEASE_3_3, RELEASE_3_3) Updated documentation by Sjoerd Vosse <s.vosse@vumc.nl> 2016-09-12 14:24:00 +0000;
  • f58ea01 Bug repair by Sjoerd Vosse <s.vosse@vumc.nl> 2016-09-12 14:22:22 +0000;
  • 7f36dc7 Bug repair, solved numerical problem by Sjoerd Vosse <s.vosse@vumc.nl> 2016-09-12 14:20:50 +0000;
  • 9ba4745 bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • 6b8a7ea Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • 9ce9798 Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • ec37fdd Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • 4b0bf3a (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • c218076 Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • 83f75ac Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • eb7b8ea (origin/RELEASE_3_1, RELEASE_3_1) Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • d1e1da4 Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • 5820718 Bumping versions after creating 3.0 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:47:41 +0000;
  • 9e851eb (origin/RELEASE_3_0, RELEASE_3_0) Creating branch for BioC 3.0 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:46:02 +0000;
  • 4007d63 Bump package versions prior to creating the 3.0 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:38:33 +0000;
  • 29bb41f Second version bump after creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:21:21 +0000;
  • ada3537 (origin/RELEASE_2_14, RELEASE_2_14) Creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:17:46 +0000;
  • 844be1f First version bump prior to creating 2.14 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:07:21 +0000;
  • 7a6cb1d Updated mad() to allow for missings and replaced cat()and print() by message() by Sjoerd Vosse <s.vosse@vumc.nl> 2014-02-25 11:40:06 +0000;
  • 89541b6 rename inst/doc to vignettes and bump version by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-11-01 20:01:32 +0000;
  • 67f62d7 bump version after release branch has been created by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:47:19 +0000;
  • 53267e7 (origin/RELEASE_2_13, RELEASE_2_13) Creating branch for BioC 2.13 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:43:43 +0000;
  • d1cbdd1 bump versions prior to creating BioC 2.13 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:29:21 +0000;
  • 4c3ebf5 Bump y in version x.y.z to odd number in devel by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 22:06:11 +0000;
  • 3b6345b (origin/RELEASE_2_12, RELEASE_2_12) Creating branch for BioC 2.12 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:56:22 +0000;
  • 32d084f bump y of x.y.z version number for BioC 2.12 release by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:32:27 +0000;
  • bcb52fd bump package versions after creating 2.11 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:43:56 +0000;
  • 220845c (origin/RELEASE_2_11, RELEASE_2_11) Creating branch for BioC 2.11 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:37:11 +0000;
  • 921327e Bump all packages before creating 2.11 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:16:24 +0000;
  • dd57b03 Updates manual files (repaired Warnings) and 1 (rare) bug by Sjoerd Vosse <s.vosse@vumc.nl> 2012-09-24 11:58:31 +0000;
  • 3b9c5e8 Fixed bugs for nclass=4 calling by Sjoerd Vosse <s.vosse@vumc.nl> 2012-07-23 09:24:52 +0000;
  • 70ccd72 Bumped up version number by Sjoerd Vosse <s.vosse@vumc.nl> 2012-05-10 13:45:42 +0000;
  • 774d922 Small bug fix by Sjoerd Vosse <s.vosse@vumc.nl> 2012-05-08 12:16:55 +0000;
  • 51a38de Updated NAMESPACE and DESCRIPTION by Sjoerd Vosse <s.vosse@vumc.nl> 2012-04-23 12:26:15 +0000;
  • 7dbb00c New description and NAMESPACE by Sjoerd Vosse <s.vosse@vumc.nl> 2012-04-23 12:18:55 +0000;
  • fb48d23 Updated vignette by Sjoerd Vosse <s.vosse@vumc.nl> 2012-04-23 12:12:30 +0000;
  • dc8986c Removing make_cghRaw, now part of CGHbase by Sjoerd Vosse <s.vosse@vumc.nl> 2012-04-23 12:11:44 +0000;
  • a3a8893 Changes to CGHcall.R: 5 state calling, faster optimization, allows parallel computing Changes for segmentation: double undo function. by Sjoerd Vosse <s.vosse@vumc.nl> 2012-04-23 12:10:30 +0000;
  • badadd0 bumped version numbers after creating 2.10 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:15:56 +0000;
  • 1929ff3 (origin/RELEASE_2_10, RELEASE_2_10) Creating branch for BioC 2.10 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:10:45 +0000;
  • e27a6ad first version bump prior to creating 2.10 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:05:02 +0000;
  • 5c84a69 version bump for start of 2.10 development cycle by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-10-31 23:12:28 +0000;
  • 043a180 (origin/RELEASE_2_9, RELEASE_2_9) Creating branch for BioC 2.9 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-10-31 23:05:58 +0000;
  • e83274d bumped package version numbers prior to creating 2.9 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-10-31 22:59:03 +0000;
  • ee03885 Removed generic classes cghRaw,cghSeg,cghCall by Sjoerd Vosse <s.vosse@vumc.nl> 2011-10-12 10:41:06 +0000;
  • 8b694f8 Minor changes to methods-cghCall, methods-cghSeg and methods-cghRaw. by Sjoerd Vosse <s.vosse@vumc.nl> 2011-09-02 09:20:38 +0000;
  • 2d89717 Removing PDF versions of the vignettes (they get automatically built by the build system during 'R CMD build'), as well as other temporary/unneeded files. by Herve Pages <hpages@fhcrc.org> 2011-04-14 01:14:51 +0000;
  • 3a8f5b2 (origin/RELEASE_2_8, RELEASE_2_8) Removing PDF versions of the vignettes (they get automatically built by the build system during 'R CMD build'), as well as other temporary/unneeded files. by Herve Pages <hpages@fhcrc.org> 2011-04-14 01:03:42 +0000;
  • 20df47b Bumped version numbers again for new BioC 2.9 devel cycle. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-04-13 22:36:43 +0000;
  • a0362b6 Creating branch for BioC 2.8 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-04-13 22:32:21 +0000;
  • 55200b6 Bumped version numbers for BioC 2.8 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2011-04-13 22:27:35 +0000;
  • 3aae8f3 removed invalid biocViews terms by Dan Tenenbaum <dtenenba@fhcrc.org> 2010-11-06 21:29:12 +0000;
  • 49b7b72 Bumped version numbers again for new BioC 2.8 devel cycle. ERRATA: Previous bump was for BioC 2.7 release (of course), not 2.6! by Herve Pages <hpages@fhcrc.org> 2010-10-18 05:57:44 +0000;
  • 754d315 (origin/RELEASE_2_7, RELEASE_2_7) Creating branch for BioC 2.7 release by Herve Pages <hpages@fhcrc.org> 2010-10-18 05:49:17 +0000;
  • c5e86f6 Bumped version numbers for BioC 2.6 release by Herve Pages <hpages@fhcrc.org> 2010-10-18 05:34:23 +0000;
  • 83ddc66 Tweaks to get rid of warnings. by Marc Carlson <mcarlson@fhcrc.org> 2010-10-07 17:33:29 +0000;
  • 564cfa5 git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CGHcall@49998 bc3139a8-67e5-0310-9ffc-ced21a209358 by Sjoerd Vosse <s.vosse@vumc.nl> 2010-10-07 13:33:47 +0000;
  • 372d7cb git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CGHcall@49997 bc3139a8-67e5-0310-9ffc-ced21a209358 by Sjoerd Vosse <s.vosse@vumc.nl> 2010-10-07 13:32:01 +0000;
  • 041abf8 git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CGHcall@49489 bc3139a8-67e5-0310-9ffc-ced21a209358 by Sjoerd Vosse <s.vosse@vumc.nl> 2010-09-20 08:54:34 +0000;
  • 1e63016 Bumped version numbers for BioC 2.7 trunk by Patrick Aboyoun <unknown> 2010-04-22 18:45:15 +0000;
  • 50b2c01 (origin/RELEASE_2_6, RELEASE_2_6) git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/CGHcall@46404 bc3139a8-67e5-0310-9ffc-ced21a209358 by Patrick Aboyoun <unknown> 2010-04-22 18:36:49 +0000;
  • 9622da8 Bumped version numbers for BioC 2.6 release by Patrick Aboyoun <unknown> 2010-04-22 18:21:23 +0000;
  • ae13dcb Package version bump for BioC 2.6 devel. by Patrick Aboyoun <unknown> 2009-10-27 23:45:24 +0000;
  • c59b5c1 (origin/RELEASE_2_5, RELEASE_2_5) git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/CGHcall@42685 bc3139a8-67e5-0310-9ffc-ced21a209358 by Patrick Aboyoun <unknown> 2009-10-27 23:38:58 +0000;