Bioconductor Code: BiocSet

Graph of BiocSet

ecfe3d2 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:18:17 -0400;
e2c4d12 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:18:17 -0400;
16f4eb8 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:14:15 -0400;
6254b15 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:14:15 -0400;
b839121 map_*() propagates metadata by Martin Morgan <Martin.Morgan@RoswellPark.org> 2022-12-30 09:49:20 -0500;
9d2263e (origin/RELEASE_3_16, RELEASE_3_16) map_*() propagates metadata by Martin Morgan <Martin.Morgan@RoswellPark.org> 2022-12-30 09:49:20 -0500;
82b6439 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:21:00 -0400;
1ca15b3 bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:21:00 -0400;
e3d8c25 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:01:18 +0000;
333920f (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:01:18 +0000;
1f7d340 (origin/RELEASE_3_14, RELEASE_3_14) update RELEASE version number by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-11-02 15:26:58 -0400;
ad19adf bug fix: fix failing kegg set test by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-11-02 15:26:58 -0400;
63b4187 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:56:12 +0000;
16bdd80 bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:56:12 +0000;
183e596 bug fix: fixed failing kegg test by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-10-19 11:27:18 -0400;
01a4533 Version bump for devel by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-08-05 16:15:06 -0400;
9572684 (origin/RELEASE_3_13, RELEASE_3_13) Update release version number by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-08-05 15:24:49 -0400;
84cb579 Bug fix: fix failing test by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-08-05 15:23:11 -0400;
5cefb74 Bug fix: fix failing test by Kayla-Morrell <kayla.morrell@roswellpark.org> 2021-08-05 15:23:11 -0400;
5e6ce44 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:48:11 +0000;
af9d883 bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:48:11 +0000;
c2a7d86 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:51:46 -0400;
5397e23 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:51:46 -0400;
8d5c3bc Updated NEWS file for 3.12 release by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-10-23 09:54:49 -0400;
39705eb Version bump for BiocIO integration by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-09-24 11:02:23 -0400;
af29f0e Changes to import / export by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-09-03 10:42:05 -0400;
92bd4aa Version bump for GeneSetCollection work by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-13 13:31:26 -0400;
0bb80e0 Merge branch 'master' of https://github.com/Bioconductor/BiocSet into GeneSetCollection_work by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-13 13:26:36 -0400;
303cdaa Addition of tests by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-12 15:06:45 -0400;
c2539d0 Addition of documentation by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-12 14:39:04 -0400;
f28bd31 Version bump for lastest OBO work by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-12 13:58:29 -0400;
604e6c6 Creation of GeneSetCollection functions by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-12 13:41:09 -0400;
5a178c9 Tests improved by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-10 12:18:38 -0400;
cf9d9ae Merge branch 'master' of https://github.com/Bioconductor/BiocSet into exportOBO by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-10 10:23:27 -0400;
a7119f6 Addition of documentation for relation functions by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-06 14:26:00 -0400;
d425545 Clean up of internal .*_elementset functions by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-08-06 10:52:51 -0400;
06cd3ce Adding in ancestor functionality by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-07-24 14:53:52 -0400;
0ca64d8 Continued work on ancestry functions by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-07-22 11:37:48 -0400;
79a9b2d (origin/RELEASE_3_11, RELEASE_3_11) update RELEASE version number by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-07-21 10:55:25 -0400;
4cfed97 bug fix: fixed tests for kegg_set by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-07-21 10:55:25 -0400;
792eac3 Improving functions by Kayla-Morrell <kayla.morrell@roswellpark.org> 2020-07-21 10:35:30 -0400;
46e0d01 refactor import-OBO by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-07-16 04:15:07 -0400;
69f840f Improvements to import/export by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-26 09:14:45 -0400;
b38b728 Improvements made to import by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-24 15:05:35 -0400;
b7a5d94 Clean up to .export_obo() by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-22 12:55:05 -0400;
253992c make OBOSet-class public by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-06-20 10:18:40 -0400;
755a8c7 quieten build and run by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-06-19 14:22:00 -0400;
7bcab6e update unit tests by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-06-19 14:21:40 -0400;
951a4b4 improve import,OBOFile-method by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-06-19 13:48:03 -0400;
f8032ce update export,OBOFile-method by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-06-17 13:28:10 -0400;
9858ef8 BiocSet extends S4Vectors::Annotate by Martin Morgan <Martin.Morgan@RoswellPark.org> 2020-06-17 13:21:16 -0400;
0e2c962 More changes to export.BiocSet_to_oboset() by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-17 10:34:15 -0400;
47da1a2 Work on export of OBO file by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-16 17:06:28 -0400;
e8aa79b version bump for import functionality by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-10 14:06:03 -0400;
163d86e Minor changes to import by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-10 14:03:09 -0400;
cea7480 Tests added for importing obo files by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-08 14:17:28 -0400;
69a86cd Improvements made to import of obo file by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-05 11:55:41 -0400;
c9eafdf Merge branch 'master' of https://github.com/Bioconductor/BiocSet into importOBO by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-05 11:38:31 -0400;
74b2272 Argument added to import obo function by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-05 11:18:46 -0400;
0ad15e7 Addition of smaller obo file by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-05 10:30:26 -0400;
55d6273 Bug fixes to tests by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-04 13:27:12 -0400;
a4b4220 Bug fixes to tests by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-04 13:27:12 -0400;
01d12ee Improvements made to import OBO functionality by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-04 12:33:04 -0400;
2892545 Helper functions added by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-02 13:54:55 -0400;
875960c Splitting up the import-class file by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-06-02 11:57:29 -0400;
cc982dc bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:32:39 +0000;
b10b94c bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:32:39 +0000;
0e67084 Changes to fix failing test(s) by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-04-24 16:40:28 -0400;
69eb695 Changes in preparation for release by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2020-04-15 11:41:15 -0400;
4a1e9cf Merge pull request <a href="#1">#1</a> from Bioconductor/BiocSet-from-list by Kayla-Morrell <32339524+Kayla-Morrell@users.noreply.github.com> 2019-12-11 14:00:55 -0500;
ff8df98 allow BiocSet(list(...)) construction by Martin Morgan <Martin.Morgan@RoswellPark.org> 2019-12-09 08:56:55 +0100;
55f2e04 update documentation to roxygen 7.0.2 by Martin Morgan <Martin.Morgan@RoswellPark.org> 2019-12-09 08:06:02 +0100;
12d71b2 (origin/RELEASE_3_10, RELEASE_3_10) update RELEASE version number by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-11-06 14:04:48 -0500;
2dd163f bug fix: fix tests to clear ERROR by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-11-06 14:04:48 -0500;
ab7e47b bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:43:48 -0400;
caa761e bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:12:18 -0400;
ec33450 Improvements for review by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-10-23 12:32:24 -0400;
8089f78 Version bump by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-10-22 12:54:57 -0400;
8a5135f Fixed issue with `intersect_single()` by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-10-22 12:52:59 -0400;
44ba898 Improvements made from review by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-10-21 14:45:35 -0400;
806ef6a Fix tests for `kegg_sets()` by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-21 07:46:26 -0400;
489aa31 Changes made to test by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-05 11:38:19 -0400;
7b3eefc Minor changes made to vignette text/code by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-05 09:47:48 -0400;
e806339 Removal of EnsDb.Hsapiens.v86 for tests by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-04 15:01:52 -0400;
b184f4f Initializing element and set for .as.list.BiocSet by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-04 14:05:25 -0400;
9425ce7 Exporting `map_set()` method for BiocSet by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-04 14:03:39 -0400;
351b230 Merge branch 'mtmorgan-mtm-comments' by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-04 13:16:04 -0400;
97e478c add BiocSet-class alias by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 12:24:50 -0400;
d1810f6 use dplyr::union, dplyr::intersect() on man pages (masked by org.Hs.*) by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 12:20:18 -0400;
0fbafc6 add explicit alias to import,GMTFile-method by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 12:19:45 -0400;
c9fb44f update docs to reflect tbl_* renaming by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 12:07:39 -0400;
4026f20 avoid undefined globals by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 12:05:21 -0400;
7c7f156 use 'dme' rather than 'hsa' for faster kegg_set test by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 11:47:56 -0400;
5ad91ce clean up tbl_* renaming by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 11:47:45 -0400;
b5339ce rename *_by_* as *_from* by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 11:32:36 -0400;
c5e469f rename es_map_* to map_* by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 11:29:18 -0400;
ceebfac make some functions internal only by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 11:01:07 -0400;
cd4a60f move kegg_sets() into BiocFileCache use by Martin Morgan <martin.morgan@roswellpark.org> 2019-09-04 10:42:32 -0400;
01395e9 Changes made after running R CMD check by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-03 15:59:41 -0400;
1875897 More info added about new functions by Kayla-Morrell <Kayla.Morrell@roswellpark.org> 2019-09-03 14:45:06 -0400;