# Generated by roxygen2: do not edit by hand

export(batchQC)
export(batchQC_analyze)
export(batchQC_condition_adjusted)
export(batchQC_filter_genes)
export(batchQC_fsva_adjusted)
export(batchQC_num.sv)
export(batchQC_shapeVariation)
export(batchQC_sva)
export(batchQC_svregress_adjusted)
export(batchqc_circosplot)
export(batchqc_correlation)
export(batchqc_corscatter)
export(batchqc_explained_variation)
export(batchqc_heatmap)
export(batchqc_pc_explained_variation)
export(batchqc_pca)
export(batchqc_pca_svd)
export(batchtest)
export(combatPlot)
export(getShinyInput)
export(getShinyInputCombat)
export(getShinyInputOrig)
export(getShinyInputSVA)
export(getShinyInputSVAf)
export(getShinyInputSVAr)
export(gnormalize)
export(lmFitC)
export(log2CPM)
export(plot_genewise_moments)
export(plot_samplewise_moments)
export(rnaseq_sim)
export(setShinyInput)
export(setShinyInputCombat)
export(setShinyInputOrig)
export(setShinyInputSVA)
export(setShinyInputSVAf)
export(setShinyInputSVAr)
exportClasses(BatchQCout)
import(MCMCpack)
import(corpcor)
import(ggvis)
import(gplots)
import(heatmaply)
import(knitr)
import(limma)
import(matrixStats)
import(moments)
import(pander)
import(reshape2)
import(rmarkdown)
import(sva)
importFrom(Matrix,nearPD)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,rainbow)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,hist)
importFrom(graphics,image)
importFrom(graphics,layout)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,plot.new)
importFrom(graphics,points)
importFrom(graphics,rect)
importFrom(graphics,segments)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(methods,new)
importFrom(methods,setOldClass)
importFrom(shiny,runApp)
importFrom(stats,IQR)
importFrom(stats,as.dendrogram)
importFrom(stats,as.dist)
importFrom(stats,cor)
importFrom(stats,density)
importFrom(stats,dist)
importFrom(stats,dnorm)
importFrom(stats,hclust)
importFrom(stats,ks.test)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,order.dendrogram)
importFrom(stats,pf)
importFrom(stats,prcomp)
importFrom(stats,qqline)
importFrom(stats,qqnorm)
importFrom(stats,qqplot)
importFrom(stats,quantile)
importFrom(stats,rbeta)
importFrom(stats,reorder)
importFrom(stats,rgamma)
importFrom(stats,rnbinom)
importFrom(stats,rnorm)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(utils,browseURL)