Package: AnnotationHubData
Type: Package
Title: Transform public data resources into Bioconductor Data Structures
Version: 0.0.35
Author: Paul Shannon<pshannon@fhcrc.org>
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>
Depends:
    R (>= 2.15.0),
    methods,
    IRanges,
    GenomicRanges,
    GenomicFeatures (>= 1.11.16),
    rtracklayer,
    Rsamtools
Suggests:
    RUnit,
Imports:
    RCurl,
    BiocGenerics,
    rjson,
    BiocInstaller,
    rtracklayer (>= 1.19.10),
    IRanges,
    Rsamtools,
    httr,
    futile.logger (>= 1.3.0)
Description: These recipes convert a wide variety and a growing number of
    public bioinformatic data sets into easily-used standard Bioconductor data
    structures.
License: Artistic-2.0
LazyLoad: yes
biocViews: DataImport
Collate:
    Message-class.R
    ImportPreparer-class.R
    EnsemblImportPreparer-utils.R
    EnsemblFastaImportPreparer-class.R
    EnsemblGtfImportPreparer-class.R
    UCSCTrackImport-utils.R
    UCSCTrackImportPreparer-class.R
    AnnotationHubMetadata-class.R
    AnnotationHubRecipe-class.R
    ensemblFastaToFaFile.R
    ensemblGtfToGRanges.R
    extendedBedToGRangesRecipe.R
    extendedBedWithAuxiliaryTableToGRangesRecipe.R
    trackToGRangesRecipe.R
    trackWithAuxiliaryTableToGRangesRecipe.R
    EncodeImportPreparer-class.R
    fakedata.R
    importBedFiles.R
    importFastaFiles.R
    genericRtracklayer.R
    nullRecipe.R
    testutils.R
    utils.R
    zzz.R