1. AUCell
  2. Graph
Graph of AUCell
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  • 32bf58e (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:59:42 -0400;
  • 8c22389 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:59:42 -0400;
  • a9e4426 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:56:34 -0400;
  • f51828f (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:56:34 -0400;
  • 1822d37 (origin/RELEASE_3_16, RELEASE_3_16) version bump in release by Sara Aibar <sara.aibar@kuleuven.be> 2022-12-01 16:43:21 +0100;
  • 6b2ee7c Add Matrix dependency by Sara Aibar <sara.aibar@kuleuven.be> 2022-12-01 16:41:36 +0100;
  • e9fbc7c Version bump in DEVEL by Sara Aibar <sara.aibar@kuleuven.be> 2022-11-03 14:08:33 +0100;
  • 7766194 version bump in release by Sara Aibar <sara.aibar@kuleuven.be> 2022-11-03 14:07:43 +0100;
  • 054da18 Solve warnings: Import Matrix by Sara Aibar <sara.aibar@kuleuven.be> 2022-11-03 12:46:20 +0100;
  • 09bb899 Solve warnings: Import Matrix by Sara Aibar <sara.aibar@kuleuven.be> 2022-11-03 12:46:20 +0100;
  • b56a4d0 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:16:21 -0400;
  • 707ff4d bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:16:21 -0400;
  • bf2b9e1 Version bump by Sara Aibar <sara.aibar@kuleuven.be> 2022-10-27 16:05:31 +0200;
  • ae650fa Added warning by Sara Aibar <sara.aibar@kuleuven.be> 2022-10-27 16:04:24 +0200;
  • 9251156 Add link to video tutorial by Sara Aibar <sara.aibar@kuleuven.be> 2022-10-25 16:39:27 +0200;
  • 5e8063c New function to assign cells at a given threshold by Sara Aibar <sara.aibar@kuleuven.be> 2022-10-25 16:15:08 +0200;
  • 3ee958f Improved support for sparse matrices: No longer needed to manually set splitByBlocks=TRUE by Sara Aibar <sara.aibar@kuleuven.be> 2022-10-25 16:13:49 +0200;
  • d55b3be update vignette by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 15:35:21 +0200;
  • fefb263 Test ranking by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 15:01:28 +0200;
  • 71e2717 version by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 14:55:39 +0200;
  • 387435b (origin/RELEASE_3_15, RELEASE_3_15) version bump in release by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 14:53:51 +0200;
  • 73aa26f Solve bug in rankings by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 14:39:28 +0200;
  • 307c0a8 v by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 14:52:22 +0200;
  • 3cbbac5 version by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 11:23:20 +0200;
  • de4cc95 Merge branch 'RELEASE_3_15' of git.bioconductor.org:packages/AUCell into RELEASE_3_15 by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 14:44:47 +0200;
  • a287a1f version by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:43:21 +0000;
  • 79cfa31 Solve bug in rankings by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 14:39:28 +0200;
  • 13a9b3d Date update by Sara Aibar <sara.aibar@kuleuven.be> 2022-05-19 11:23:20 +0200;
  • 65330c4 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:43:21 +0000;
  • 06d62e9 bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:43:21 +0000;
  • 18b7aed Update vignette by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-25 14:24:06 +0200;
  • 2dab1bd Typo in vignette by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-12 09:22:49 +0200;
  • c22e58a Merge remote-tracking branch 'origin/master' by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-08 10:33:50 +0200;
  • 609a62c Doc updates by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-08 09:40:12 +0200;
  • 6ca70ca Doc updates by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-08 09:40:12 +0200;
  • 7d016d0 Add function AUCell_run() by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-08 09:39:06 +0200;
  • 2ae1107 Remove comment by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-06 14:33:48 +0200;
  • af3a3c0 Merge remote-tracking branch 'origin/master' by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-06 14:32:41 +0200;
  • 5134821 Version bump. Typos corrected. by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-05 09:50:44 +0200;
  • 972f234 Version bump. Typos corrected. by Sara Aibar <sara.aibar@kuleuven.be> 2022-04-05 09:50:44 +0200;
  • 8bc80bb bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:38:06 +0000;
  • dfde2b6 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:38:06 +0000;
  • 82eea52 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:30:20 +0000;
  • 8849265 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:30:20 +0000;
  • 7430c16 Minor update by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2021-03-14 19:00:47 +0100;
  • a7ec729 Add function binarizeAUC by s-aibar <sara.aibar@kuleuven.vib.be> 2021-03-14 14:36:50 +0100;
  • 60b007d New functions: plotEmb_rgb() and getSetNames() by vsc31245 <vsc31245@r23i27n22.genius.hpc.kuleuven.be> 2021-01-26 13:32:12 +0100;
  • 33a3ce0 1.13.1: Add function plotEmb_rgb by vsc31245 <vsc31245@r23i27n22.genius.hpc.kuleuven.be> 2021-01-26 12:44:37 +0100;
  • be87c73 Version bump by s-aibar <s-aibar@example.com> 2020-10-29 19:51:03 +0100;
  • f4d5466 minor updates by s-aibar <s-aibar@example.com> 2020-10-29 19:49:41 +0100;
  • dfde68d Solve do paralelization error by s-aibar <s-aibar@example.com> 2020-10-29 19:49:25 +0100;
  • 62c726a bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:27:34 -0400;
  • 2286fa3 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:27:33 -0400;
  • a9afa79 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:10:23 +0000;
  • 199c33e (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:10:23 +0000;
  • 76764ad Update alias in .Rd by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-04-20 12:05:24 +0200;
  • 503a020 Remove "requirenamespace(shiny)" by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-04-13 15:39:23 +0200;
  • b372f88 remove rbokeh dependency by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-04-11 12:25:23 +0200;
  • 74650c2 r bokeh dependency by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-04-06 11:39:46 +0200;
  • af6f510 Solve rbokeh dependency by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-04-02 15:20:42 +0200;
  • e861862 remove requirenamespace(rbokeh) by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-03-26 09:00:46 +0100;
  • 7ad1cac remove requirenamespace(rbokeh) call by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-03-22 10:36:26 +0100;
  • 7557d40 Updates for R 4.0 by Sara Aibar Santos <u0103631@gbw-l-m0361.local> 2020-03-17 13:57:53 +0100;
  • bacdf30 cbind/rbind: use (instead of overwriting) BiocGenerics definition by s-aibar <s-aibar@example.com> 2020-03-09 11:28:33 +0100;
  • e199b22 add warning by s-aibar <s-aibar@example.com> 2020-02-05 18:12:29 +0100;
  • 220bdc5 add warning by s-aibar <s-aibar@example.com> 2020-02-05 18:11:58 +0100;
  • 926ebfa add warning by s-aibar <s-aibar@example.com> 2020-02-05 18:11:38 +0100;
  • 5428214 added SNOW option to parallel calcAUC by s-aibar <s-aibar@example.com> 2020-02-05 17:37:10 +0100;
  • d339c53 added SNOW option to parallel calcAUC by s-aibar <s-aibar@example.com> 2020-02-05 17:37:10 +0100;
  • 080ae5f calcAUC update by s-aibar <s-aibar@example.com> 2020-02-05 17:02:35 +0100;
  • 8ab2487 warnings @ calcAUC by s-aibar <s-aibar@example.com> 2020-02-05 16:14:12 +0100;
  • 7e31205 add rbind function by s-aibar <s-aibar@example.com> 2020-02-05 15:06:52 +0100;
  • d8ed887 Merge remote-tracking branch 'upstream/master' by s-aibar <s-aibar@example.com> 2020-02-05 15:04:56 +0100;
  • cb92d85 Merge branch 'master' of github.com:aertslab/AUCell by s-aibar <s-aibar@example.com> 2020-02-05 14:56:19 +0100;
  • 6c0ae11 added rbind by s-aibar <s-aibar@example.com> 2020-02-05 14:55:50 +0100;
  • b14a863 added rbind by s-aibar <s-aibar@example.com> 2020-02-05 14:55:50 +0100;
  • 3da3e3e bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:42:27 -0400;
  • b1f460c (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:10:44 -0400;
  • 87a84fb cbind help by s-aibar <s-aibar@example.com> 2019-10-27 20:37:10 +0100;
  • 2668bb4 (origin/RELEASE_3_9, RELEASE_3_9) calcAUC: Checking for empty gene sets by s-aibar <s-aibar@example.com> 2019-06-05 11:50:10 +0200;
  • 194c1ba calcAUC: Checking for empty gene-sets by s-aibar <s-aibar@example.com> 2019-06-05 11:47:07 +0200;
  • d1e9a48 Merge branch 'master' of https://github.com/aertslab/AUCell by s-aibar <s-aibar@example.com> 2019-05-26 14:25:02 +0200;
  • 23628f6 Adding example for cbind by s-aibar <s-aibar@example.com> 2019-05-26 14:23:54 +0200;
  • 59a7742 Adding example for cbind by s-aibar <s-aibar@example.com> 2019-05-26 14:23:54 +0200;
  • 02468e1 Minor update (namespace for cbind) by s-aibar <s-aibar@example.com> 2019-05-25 13:45:45 +0200;
  • 967d053 Added function cbind() by s-aibar <s-aibar@example.com> 2019-05-20 11:36:13 +0200;
  • 07ba33b Merge remote-tracking branch 'upstream/master' by s-aibar <s-aibar@example.com> 2019-05-10 17:13:55 +0200;
  • 9b37907 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:15:10 -0400;
  • 5d91619 bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:08 -0400;
  • 7897890 Adding HTML version of the vignette by s-aibar <s-aibar@example.com> 2019-02-07 15:40:39 +0100;
  • 33773fc Merge branch 'master' of https://github.com/aertslab/AUCell by s-aibar <s-aibar@example.com> 2019-01-31 13:30:28 +0100;
  • 836c44e Plot tsne by s-aibar <s-aibar@example.com> 2019-01-31 13:19:15 +0100;
  • de6935a Plot tsne by s-aibar <s-aibar@example.com> 2019-01-31 13:19:15 +0100;
  • cec7989 Merge remote-tracking branch 'upstream/master' by s-aibar <s-aibar@example.com> 2019-01-29 17:37:30 +0100;
  • b8072ac Version bump by s-aibar <s-aibar@example.com> 2019-01-29 17:25:58 +0100;
  • 7fcbb41 Extra check for selected threshold by s-aibar <s-aibar@example.com> 2019-01-29 17:25:48 +0100;
  • 4137189 Extra checks for aucThr by s-aibar <s-aibar@example.com> 2019-01-29 17:25:34 +0100;
  • 3550c5e Catch error related to "cut: breaks not unique" by s-aibar <s-aibar@example.com> 2019-01-29 17:25:09 +0100;
  • d647498 Updates due to new version of roxygen by s-aibar <s-aibar@example.com> 2019-01-29 17:24:46 +0100;
  • bf50c70 Merge branch 'master' of https://github.com/aertslab/AUCell by vsc31245 <vsc31245@r6i0n13.icts.leuven.vsc> 2019-01-24 22:31:38 +0100;