Package: ASpli Type: Package Title: Analysis of Alternative Splicing Using RNA-Seq Version: 2.13.0 Date: 2023-08-02 Author: Estefania Mancini, Andres Rabinovich, Javier Iserte, Marcelo Yanovsky and Ariel Chernomoretz License: GPL biocViews: ImmunoOncology, GeneExpression, Transcription, AlternativeSplicing, Coverage, DifferentialExpression, DifferentialSplicing, TimeCourse, RNASeq, GenomeAnnotation, Sequencing, Alignment Depends: methods, grDevices, stats, utils, parallel, edgeR, limma, AnnotationDbi Imports: GenomicRanges, GenomicFeatures, BiocGenerics, IRanges, GenomicAlignments, Gviz, S4Vectors, Rsamtools, BiocStyle, igraph, htmltools, data.table, UpSetR, tidyr, DT, MASS, grid, graphics, pbmcapply Description: Integrative pipeline for the analysis of alternative splicing using RNAseq. Suggests: Maintainer: Ariel Chernomoretz <algo107@gmail.com>